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ModBase: Database of Comparative Protein Structure Models

Model Details Page

Sequence Information

Primary Database Link Q19R12
Original Database ID EN ENSP00000339302.5
Organism Homo sapiens
Annotation subname: full=t calcium channel
alpha 1g subunit variant 89;
Sequence Length 2250

Dataset Information:

The newest dataset for this sequence was created on 2020-05-15. If you think that a better template has been added to the template database since, you can start a new calculation.

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Model Information

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Target Region736-965
Protein Length2250
Template PDB Code6n4iA
Template Region726-943
Sequence Identity34%
E-Value0
GA3410.52
MPQS0.365522
z-DOPE0.53
TSVMod MethodMSALL
TSVMod RMSD10.795
TSVMod NO350.514
DatasetMW-Human_D15
ModPipe VersionSVN.r1693
Model Date2020-05-15

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Cross-references

Show obsolete/secondary identifiers
Mutation Data
LS-SNP SNP Information available through LS-SNP
Template Structure
PDB6n4i
DBALI6n4iA 
JenaImageLibrary6n4i 
Target Sequence
UniProtKBQ19R12SubName: Full=T calcium channel alpha 1G subunit variant 89;
InterProQ19R12 
PFAMQ19R12 
ProdomQ19R12 
UniProtKBQ19R12SubName: Full=T calcium channel alpha 1G subunit variant 89;
InterProQ19R12 
PFAMQ19R12 
ProdomQ19R12 
RefSeqNP_938201.1 voltage-dependent T-type calcium channel subunit alpha-1G isoform 12 [Homo sapiens]
GenPept101443302T calcium channel alpha 1G subunit variant 89
GenPept7021333AF190860_1 low voltage-activated T-type calcium channel alpha 1G splice variant CavT.1a
GenPept4761541AF126966_1 voltage-dependent calcium channel alpha 1G subunit a isoform
GenPept38505288 voltage-dependent T-type calcium channel subunit alpha-1G isoform 12 [Homo sapiens]
GenPept378485770Sequence 283 from patent US 8110361
GenPept209985003unnamed protein product
GenBankAAF35287.1AF190860_1 low voltage-activated T-type calcium channel alpha 1G splice variant CavT.1a [Homo sapiens]
GenBankABF69906.1 T calcium channel alpha 1G subunit variant 89 [Homo sapiens]
GenBankAAD29401.1AF126966_1 voltage-dependent calcium channel alpha 1G subunit a isoform [Homo sapiens]
ENSEMBLENSP00000339302 
 
 
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