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cacna1g calcium channel, voltage-dependent, T type, alpha 1G subunit [ Syngnathus scovelli (Gulf pipefish) ]

Gene ID: 125991627, updated on 22-Mar-2024

Summary

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Gene symbol
cacna1g
Gene description
calcium channel, voltage-dependent, T type, alpha 1G subunit
Gene type
protein coding
RefSeq status
MODEL
Organism
Syngnathus scovelli
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Syngnathus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
39
Annotation release Status Assembly Chr Location
RS_2023_02 current RoL_Ssco_1.1 (GCF_024217435.1) Unplaced Scaffold NW_026061305.1 (10086174..10160807)

NW_026061305.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis associated 20 Neighboring gene uncharacterized LOC125991702 Neighboring gene uncharacterized LOC125991704 Neighboring gene chromobox protein homolog 2 Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026061305 Unplaced Scaffold Reference RoL_Ssco_1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion import IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane depolarization during action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuronal action potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent T-type calcium channel subunit alpha-1G

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_024217435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference RoL_Ssco_1.1

Genomic

  1. NW_026061305.1 Reference RoL_Ssco_1.1

    Range
    10086174..10160807
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_049759721.1 → XP_049615678.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X4

  2. XM_049759722.1 → XP_049615679.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X5

  3. XM_049759717.1 → XP_049615674.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X1

  4. XM_049759729.1 → XP_049615686.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X12

  5. XM_049759723.1 → XP_049615680.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X6

  6. XM_049759732.1 → XP_049615689.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X14

  7. XM_049759731.1 → XP_049615688.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X13

  8. XM_049759733.1 → XP_049615690.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X15

  9. XM_049759718.1 → XP_049615675.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X2

  10. XM_049759724.1 → XP_049615681.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X7

  11. XM_049759725.1 → XP_049615682.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X8

  12. XM_049759720.1 → XP_049615677.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X3

  13. XM_049759726.1 → XP_049615683.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X9

  14. XM_049759728.1 → XP_049615685.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X11

  15. XM_049759727.1 → XP_049615684.1  voltage-dependent T-type calcium channel subunit alpha-1G isoform X10

Nucleotide Protein Strain
Heading Accession and Version

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