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Nucleic Acids Res. 1983 Mar 11; 11(5): 1475–1489.
PMCID: PMC325809
PMID: 6828386

Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei.

Abstract

We have developed a procedure for preparing extracts from nuclei of human tissue culture cells that directs accurate transcription initiation in vitro from class II promoters. Conditions of extraction and assay have been optimized for maximum activity using the major late promoter of adenovirus 2. The extract also directs accurate transcription initiation from other adenovirus promoters and cellular promoters. The extract also directs accurate transcription initiation from class III promoters (tRNA and Ad 2 VA).

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Selected References

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  • Weil PA, Luse DS, Segall J, Roeder RG. Selective and accurate initiation of transcription at the Ad2 major late promotor in a soluble system dependent on purified RNA polymerase II and DNA. Cell. 1979 Oct;18(2):469–484. [PubMed] [Google Scholar]
  • Luse DS, Roeder RG. Accurate transcription initiation on a purified mouse beta-globin DNA fragment in a cell-free system. Cell. 1980 Jul;20(3):691–699. [PubMed] [Google Scholar]
  • Corden J, Wasylyk B, Buchwalder A, Sassone-Corsi P, Kedinger C, Chambon P. Promoter sequences of eukaryotic protein-coding genes. Science. 1980 Sep 19;209(4463):1406–1414. [PubMed] [Google Scholar]
  • Wasylyk B, Kédinger C, Corden J, Brison O, Chambon P. Specific in vitro initiation of transcription on conalbumin and ovalbumin genes and comparison with adenovirus-2 early and late genes. Nature. 1980 Jun 5;285(5764):367–373. [PubMed] [Google Scholar]
  • Lee DC, Roeder RG, Wold WS. DNA sequences affecting specific initiation of transcription in vitro from the EIII promoter of adenovirus 2. Proc Natl Acad Sci U S A. 1982 Jan;79(1):41–45. [PMC free article] [PubMed] [Google Scholar]
  • Matsui T, Segall J, Weil PA, Roeder RG. Multiple factors required for accurate initiation of transcription by purified RNA polymerase II. J Biol Chem. 1980 Dec 25;255(24):11992–11996. [PubMed] [Google Scholar]
  • Rio D, Robbins A, Myers R, Tjian R. Regulation of simian virus 40 early transcription in vitro by a purified tumor antigen. Proc Natl Acad Sci U S A. 1980 Oct;77(10):5706–5710. [PMC free article] [PubMed] [Google Scholar]
  • Hu SL, Manley JL. DNA sequence required for initiation of transcription in vitro from the major late promoter of adenovirus 2. Proc Natl Acad Sci U S A. 1981 Feb;78(2):820–824. [PMC free article] [PubMed] [Google Scholar]
  • Tsai SY, Tsai MJ, O'Malley BW. Specific 5' flanking sequences are required for faithful initiation of in vitro transcription of the ovalbumin gene. Proc Natl Acad Sci U S A. 1981 Feb;78(2):879–883. [PMC free article] [PubMed] [Google Scholar]
  • Grosveld GC, Shewmaker CK, Jat P, Flavell RA. Localization of DNA sequences necessary for transcription of the rabbit beta-globin gene in vitro. Cell. 1981 Jul;25(1):215–226. [PubMed] [Google Scholar]
  • Grosschedl R, Birnstiel ML. Identification of regulatory sequences in the prelude sequences of an H2A histone gene by the study of specific deletion mutants in vivo. Proc Natl Acad Sci U S A. 1980 Mar;77(3):1432–1436. [PMC free article] [PubMed] [Google Scholar]
  • Rio D, Robbins A, Myers R, Tjian R. Regulation of simian virus 40 early transcription in vitro by a purified tumor antigen. Proc Natl Acad Sci U S A. 1980 Oct;77(10):5706–5710. [PMC free article] [PubMed] [Google Scholar]
  • Wu GJ, Zubay G. Prolonged transcription in a cell-free system involving nuclei and cytoplasm. Proc Natl Acad Sci U S A. 1974 May;71(5):1803–1807. [PMC free article] [PubMed] [Google Scholar]
  • Sugden B, Keller W. Mammalian deoxyribonucleic acid-dependent ribonucleic acid polymerases. I. Purification and properties of an -amanitin-sensitive ribonucleic acid polymerase and stimulatory factors from HeLa and KB cells. J Biol Chem. 1973 Jun 10;248(11):3777–3788. [PubMed] [Google Scholar]
  • Hodo HG, 3rd, Blatti SP. Purification using polyethylenimine precipitation and low molecular weight subunit analyses of calf thymus and wheat germ DNA-dependent RNA polymerase II. Biochemistry. 1977 May 31;16(11):2334–2343. [PubMed] [Google Scholar]
  • Lee DC, Roeder RG. Transcription of adenovirus type 2 genes in a cell-free system: apparent heterogeneity of initiation at some promoters. Mol Cell Biol. 1981 Jul;1(7):635–651. [PMC free article] [PubMed] [Google Scholar]
  • Luse DS, Haynes JR, VanLeeuwen D, Schon EA, Cleary ML, Shapiro SG, Lingrel JB, Roeder RG. Transcription of the beta-like globin genes and pseudogenes of the goat in a cell-free system. Nucleic Acids Res. 1981 Sep 11;9(17):4339–4354. [PMC free article] [PubMed] [Google Scholar]
  • Wasylyk B, Derbyshire R, Guy A, Molko D, Roget A, Téoule R, Chambon P. Specific in vitro transcription of conalbumin gene is drastically decreased by single-point mutation in T-A-T-A box homology sequence. Proc Natl Acad Sci U S A. 1980 Dec;77(12):7024–7028. [PMC free article] [PubMed] [Google Scholar]
  • Fire A, Baker CC, Manley JL, Ziff EB, Sharp PA. In vitro transcription of adenovirus. J Virol. 1981 Dec;40(3):703–719. [PMC free article] [PubMed] [Google Scholar]
  • Weil PA, Segall J, Harris B, Ng SY, Roeder RG. Faithful transcription of eukaryotic genes by RNA polymerase III in systems reconstituted with purified DNA templates. J Biol Chem. 1979 Jul 10;254(13):6163–6173. [PubMed] [Google Scholar]
  • Segall J, Matsui T, Roeder RG. Multiple factors are required for the accurate transcription of purified genes by RNA polymerase III. J Biol Chem. 1980 Dec 25;255(24):11986–11991. [PubMed] [Google Scholar]

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