Skip navigation
Your queries
Contact us
All
Chemicals
Diseases
Genes
Gene Ontology
Organisms
Pathways
References
Anatomy
Illuminating how chemicals affect human health.
Comparative Toxicogenomics Database
Home
About Us
Citing/Publications/Use
Data Status
Changes
Personnel
Funding
Legal Notices
Data FAIRness
Search
All Searches
Chemicals
Chemical–Gene Interactions
Chemical-Phenotype Interactions
Genes
Diseases
References
GO
Pathways
Organisms
Batch Query
Exposure Studies
Exposure Details
Anatomy
Analyze
All Tools
Batch Query
Set Analyzer
MyGeneVenn
MyVenn
VennViewer
CTD Tetramers
CTD API
Download
Data Files
Batch Query
Commercial Users
Help
All Help
FAQ
Site Map
Tutorials
Linking to CTD
Glossary
Batch Query
1
Select your input type
Chemicals
(MeSH
®
names, synonyms, or IDs, or CAS RNs)
Genes
(NCBI symbols or IDs)
Phenotypes
(GO names, synonyms, or IDs)
Diseases
(MeSH
®
or OMIM names, synonyms, or IDs)
References
(PubMed
®
IDs or DOIs)
Gene Ontology terms
(GO names, synonyms, or IDs)
Pathways
(KEGG or REACTOME names or IDs)
Anatomy Terms
(MeSH
®
, Uberon, or Cell Ontology names or IDs)
2
Provide query terms (up to 4,000)
Return-, tab- or |-delimited
Or
upload
a tab-separated file:
Identifiers column:
3
Choose data to download
Data
Chemical–gene interactions
Curated
Type(s):
ANY
abundance
activity
binding
cotreatment
expression
folding
localization
metabolic processing
— acetylation
— acylation
— alkylation
— amination
— carbamoylation
— carboxylation
— chemical synthesis
— degradation
— cleavage
— hydrolysis
— ethylation
— glutathionylation
— glycation
— glycosylation
— glucuronidation
— N-linked glycosylation
— O-linked glycosylation
— hydroxylation
— lipidation
— farnesylation
— geranoylation
— myristoylation
— palmitoylation
— prenylation
— methylation
— nitrosation
— nucleotidylation
— oxidation
— phosphorylation
— polymerization
— reduction
— ribosylation
— ADP-ribosylation
— sulfation
— sumoylation
— ubiquitination
mutagenesis
reaction
response to substance
splicing
stability
transport
— secretion
— export
— uptake
— import
Chemical associations
All
Curated
Inferred
Gene associations
All
Curated
Inferred
Phenotype associations
All
Curated
Inferred
Disease associations
All
Curated
Inferred
Gene Ontology associations
Enriched
(recommended)
All
Ontologies
Biological Process
Molecular Function
Cellular Component
Pathway associations
All
Curated
Inferred
Enriched
(recommended)
Format
TSV
(tab-separated values)
CSV
(comma-separated values)
JSON
XML
4
Add a filter
Hierarchical or Direct Relationships
Return data for exact input query terms only
Return data for exact input query terms and any descendant terms
5
Select Report Output
Write report to a file
Write report to the browser
See also:
Data Downloads
to obtain complete data sets.