Entry - #617770 - SPINOCEREBELLAR ATAXIA 46; SCA46 - OMIM
# 617770

SPINOCEREBELLAR ATAXIA 46; SCA46


Alternative titles; symbols

SPINOCEREBELLAR ATAXIA, 46, AUTOSOMAL DOMINANT, WITH SENSORY AXONAL NEUROPATHY


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
19q13.2 ?Spinocerebellar ataxia 46 617770 AD 3 PLD3 615698
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
HEAD & NECK
Eyes
- Nystagmus
- Slow saccades
- Saccadic dysmetria
- Square-wave jerk
NEUROLOGIC
Central Nervous System
- Gait ataxia
- Limb ataxia
- Dysarthria
- Positive Romberg sign
- Cerebellar atrophy, mild
Peripheral Nervous System
- Sensory axonal neuropathy
- Impaired distal sensation
- Decreased or unobtainable amplitudes of sensory potentials
- Decreased density of myelinated fibers seen on sural nerve biopsy
MISCELLANEOUS
- Adult onset (range 35 to 69 years)
- Slow progression
- One large Dutch family has been reported (last curated November 2017)
MOLECULAR BASIS
- Caused by mutation in the phospholipase D family, member 3 gene (PLD3, 615698.0002)
Spinocerebellar ataxia - PS164400 - 48 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.33 Spinocerebellar ataxia 21 AD 3 607454 TMEM240 616101
1p35.2 Spinocerebellar ataxia 47 AD 3 617931 PUM1 607204
1p32.2-p32.1 Spinocerebellar ataxia 37 AD 3 615945 DAB1 603448
1p13.2 Spinocerebellar ataxia 19 AD 3 607346 KCND3 605411
2p16.1 Spinocerebellar ataxia 25 AD 3 608703 PNPT1 610316
3p26.1 Spinocerebellar ataxia 15 AD 3 606658 ITPR1 147265
3p26.1 Spinocerebellar ataxia 29, congenital nonprogressive AD 3 117360 ITPR1 147265
3p14.1 Spinocerebellar ataxia 7 AD 3 164500 ATXN7 607640
3q25.2 ?Spinocerebellar ataxia 43 AD 3 617018 MME 120520
4q27 ?Spinocerebellar ataxia 41 AD 3 616410 TRPC3 602345
4q34.3-q35.1 ?Spinocerebellar ataxia 30 AD 2 613371 SCA30 613371
5q32 Spinocerebellar ataxia 12 AD 3 604326 PPP2R2B 604325
5q33.1 Spinocerebellar ataxia 45 AD 3 617769 FAT2 604269
6p22.3 Spinocerebellar ataxia 1 AD 3 164400 ATXN1 601556
6p12.1 Spinocerebellar ataxia 38 AD 3 615957 ELOVL5 611805
6q14.1 Spinocerebellar ataxia 34 AD 3 133190 ELOVL4 605512
6q24.3 Spinocerebellar ataxia 44 AD 3 617691 GRM1 604473
6q27 Spinocerebellar ataxia 17 AD 3 607136 TBP 600075
7q21.2 ?Spinocerebellar ataxia 49 AD 3 619806 SAMD9L 611170
7q22-q32 Spinocerebellar ataxia 18 AD 2 607458 SCA18 607458
7q32-q33 Spinocerebellar ataxia 32 AD 2 613909 SCA32 613909
11q12 Spinocerebellar ataxia 20 AD 4 608687 SCA20 608687
11q13.2 Spinocerebellar ataxia 5 AD 3 600224 SPTBN2 604985
12q24.12 {Amyotrophic lateral sclerosis, susceptibility to, 13} AD 3 183090 ATXN2 601517
12q24.12 Spinocerebellar ataxia 2 AD 3 183090 ATXN2 601517
13q21 Spinocerebellar ataxia 8 AD 3 608768 ATXN8 613289
13q21.33 Spinocerebellar ataxia 8 AD 3 608768 ATXN8OS 603680
13q33.1 Spinocerebellar ataxia 27B, late-onset AD 3 620174 FGF14 601515
13q33.1 Spinocerebellar ataxia 27A AD 3 193003 FGF14 601515
14q32.11-q32.12 ?Spinocerebellar ataxia 40 AD 3 616053 CCDC88C 611204
14q32.12 Machado-Joseph disease AD 3 109150 ATXN3 607047
15q15.2 Spinocerebellar ataxia 11 AD 3 604432 TTBK2 611695
16p13.3 Spinocerebellar ataxia 48 AD 3 618093 STUB1 607207
16q21 Spinocerebellar ataxia 31 AD 3 117210 BEAN1 612051
16q22.2-q22.3 Spinocerebellar ataxia 4 AD 3 600223 ZFHX3 104155
17q21.33 Spinocerebellar ataxia 42 AD 3 616795 CACNA1G 604065
17q25.3 Spinocerebellar ataxia 50 AD 3 620158 NPTX1 602367
18p11.21 Spinocerebellar ataxia 28 AD 3 610246 AFG3L2 604581
19p13.3 ?Spinocerebellar ataxia 26 AD 3 609306 EEF2 130610
19p13.13 Spinocerebellar ataxia 6 AD 3 183086 CACNA1A 601011
19q13.2 ?Spinocerebellar ataxia 46 AD 3 617770 PLD3 615698
19q13.33 Spinocerebellar ataxia 13 AD 3 605259 KCNC3 176264
19q13.42 Spinocerebellar ataxia 14 AD 3 605361 PRKCG 176980
20p13 Spinocerebellar ataxia 23 AD 3 610245 PDYN 131340
20p13 Spinocerebellar ataxia 35 AD 3 613908 TGM6 613900
20p13 Spinocerebellar ataxia 36 AD 3 614153 NOP56 614154
22q13.31 Spinocerebellar ataxia 10 AD 3 603516 ATXN10 611150
Not Mapped Spinocerebellar ataxia 9 612876 SCA9 612876

TEXT

A number sign (#) is used with this entry because of evidence that spinocerebellar ataxia-46 (SCA46) is caused by heterozygous mutation in the PLD3 gene (615698) on chromosome 19q13. One such family has been reported.

For a discussion of genetic heterogeneity of autosomal dominant spinocerebellar ataxia, see SCA1 (164400).


Clinical Features

Van Dijk et al. (1995) reported a large Dutch kindred in which 4 sibs and their father had adult-onset sensory ataxic neuropathy with cerebellar signs. The patients presented between 41 and 65 years with swaying during walking in the dark. Additional more variable features included oculomotor abnormalities and distal sensory impairment in a stocking and glove pattern, but predominantly affecting the lower limbs. Several patients had a positive Romberg sign. Brain imaging in all 5 patients did not show cerebellar atrophy. Neurophysiologic studies showed decreased or unobtainable amplitudes of sensory potentials. Sural nerve biopsy showed decreased density of myelinated fibers and some areas of segmental remyelination. The findings were consistent with a sensory ataxia due to a sensory axonal polyneuropathy. The disorder was slowly progressive.

Nibbeling et al. (2017) reported follow-up of the family reported by van Dijk et al. (1995) and referred to the family as RF28. Affected individuals had a variable combination of sensory neuropathy and cerebellar ataxia. In a small minority of them, the cerebellar phenotype was more prominent than the sensory neuropathy. Cerebellar dysarthria was present in most, but not all, and all patients except one had abnormal oculomotor function, manifest as nystagmus, jerky pursuit, square-wave jerks, slow saccades, and saccadic dysmetria. Only some patients had cerebellar atrophy, which was mild. The average age of onset was 53.5 years (range 35 to 70).


Inheritance

The transmission pattern of SCA46 in the family reported by van Dijk et al. (1995) and Nibbeling et al. (2017) was consistent with autosomal dominant inheritance.


Molecular Genetics

In 8 affected members of a family (RF28) with SCA46, Nibbeling et al. (2017) identified a heterozygous missense mutation in the PLD3 gene (L308P; 615698.0002). The mutation, which was found by whole-exome sequencing and confirmed by Sanger sequencing, segregated with the disorder in the family. In vitro functional expression studies showed that the L308P protein was normally expressed, had normal cellular localization, and was stable. However, phospholipase D activity of the mutant protein was significantly decreased compared to wildtype. The family was 1 of 20 unrelated families with autosomal dominant SCA who underwent whole-exome sequencing.


REFERENCES

  1. Nibbeling, E. A. R., Duarri, A., Verschuuren-Bemelmans, C. C., Fokkens, M. R., Karjalainen, J. M., Smeets, C. J. L. M., de Boer-Bergsma, J. J., van der Vries, G., Dooijes, D., Bampi, G. B., van Diemen, C., Brunt, E., and 9 others. Exome sequencing and network analysis identifies shared mechanisms underlying spinocerebellar ataxia. Brain 140: 2860-2878, 2017. [PubMed: 29053796, related citations] [Full Text]

  2. van Dijk, G. W., Wokke, J. H. J., Oey, P. L., Franssen, H., Ippel, P. F., Veldman, H. A new variant of sensory ataxic neuropathy with autosomal dominant inheritance. Brain 118: 1557-1563, 1995. [PubMed: 8595484, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 11/14/2017
alopez : 11/16/2017
ckniffin : 11/15/2017

# 617770

SPINOCEREBELLAR ATAXIA 46; SCA46


Alternative titles; symbols

SPINOCEREBELLAR ATAXIA, 46, AUTOSOMAL DOMINANT, WITH SENSORY AXONAL NEUROPATHY


SNOMEDCT: 1279839002;   ORPHA: 589522;   DO: 0080288;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
19q13.2 ?Spinocerebellar ataxia 46 617770 Autosomal dominant 3 PLD3 615698

TEXT

A number sign (#) is used with this entry because of evidence that spinocerebellar ataxia-46 (SCA46) is caused by heterozygous mutation in the PLD3 gene (615698) on chromosome 19q13. One such family has been reported.

For a discussion of genetic heterogeneity of autosomal dominant spinocerebellar ataxia, see SCA1 (164400).


Clinical Features

Van Dijk et al. (1995) reported a large Dutch kindred in which 4 sibs and their father had adult-onset sensory ataxic neuropathy with cerebellar signs. The patients presented between 41 and 65 years with swaying during walking in the dark. Additional more variable features included oculomotor abnormalities and distal sensory impairment in a stocking and glove pattern, but predominantly affecting the lower limbs. Several patients had a positive Romberg sign. Brain imaging in all 5 patients did not show cerebellar atrophy. Neurophysiologic studies showed decreased or unobtainable amplitudes of sensory potentials. Sural nerve biopsy showed decreased density of myelinated fibers and some areas of segmental remyelination. The findings were consistent with a sensory ataxia due to a sensory axonal polyneuropathy. The disorder was slowly progressive.

Nibbeling et al. (2017) reported follow-up of the family reported by van Dijk et al. (1995) and referred to the family as RF28. Affected individuals had a variable combination of sensory neuropathy and cerebellar ataxia. In a small minority of them, the cerebellar phenotype was more prominent than the sensory neuropathy. Cerebellar dysarthria was present in most, but not all, and all patients except one had abnormal oculomotor function, manifest as nystagmus, jerky pursuit, square-wave jerks, slow saccades, and saccadic dysmetria. Only some patients had cerebellar atrophy, which was mild. The average age of onset was 53.5 years (range 35 to 70).


Inheritance

The transmission pattern of SCA46 in the family reported by van Dijk et al. (1995) and Nibbeling et al. (2017) was consistent with autosomal dominant inheritance.


Molecular Genetics

In 8 affected members of a family (RF28) with SCA46, Nibbeling et al. (2017) identified a heterozygous missense mutation in the PLD3 gene (L308P; 615698.0002). The mutation, which was found by whole-exome sequencing and confirmed by Sanger sequencing, segregated with the disorder in the family. In vitro functional expression studies showed that the L308P protein was normally expressed, had normal cellular localization, and was stable. However, phospholipase D activity of the mutant protein was significantly decreased compared to wildtype. The family was 1 of 20 unrelated families with autosomal dominant SCA who underwent whole-exome sequencing.


REFERENCES

  1. Nibbeling, E. A. R., Duarri, A., Verschuuren-Bemelmans, C. C., Fokkens, M. R., Karjalainen, J. M., Smeets, C. J. L. M., de Boer-Bergsma, J. J., van der Vries, G., Dooijes, D., Bampi, G. B., van Diemen, C., Brunt, E., and 9 others. Exome sequencing and network analysis identifies shared mechanisms underlying spinocerebellar ataxia. Brain 140: 2860-2878, 2017. [PubMed: 29053796] [Full Text: https://doi.org/10.1093/brain/awx251]

  2. van Dijk, G. W., Wokke, J. H. J., Oey, P. L., Franssen, H., Ippel, P. F., Veldman, H. A new variant of sensory ataxic neuropathy with autosomal dominant inheritance. Brain 118: 1557-1563, 1995. [PubMed: 8595484] [Full Text: https://doi.org/10.1093/brain/118.6.1557]


Creation Date:
Cassandra L. Kniffin : 11/14/2017

Edit History:
alopez : 11/16/2017
ckniffin : 11/15/2017



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