Entry - #620158 - SPINOCEREBELLAR ATAXIA 50; SCA50 - OMIM
 
# 620158

SPINOCEREBELLAR ATAXIA 50; SCA50


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
17q25.3 Spinocerebellar ataxia 50 620158 AD 3 NPTX1 602367
Clinical Synopsis
 
Phenotypic Series
 

INHERITANCE
- Autosomal dominant
HEAD & NECK
Eyes
- Visual disturbances
- Horizontal nystagmus
- Abnormal saccades
- Impaired smooth pursuit
- Oculomotor apraxia
- Diplopia
ABDOMEN
Gastrointestinal
- Dysphagia
NEUROLOGIC
Central Nervous System
- Cerebellar ataxia
- Gait difficulties
- Dysarthria
- Tremor
- Myoclonus
- Choreiform movements
- Dyskinesia
- Dystonia
- Cognitive impairment
- Executive dysfunction
- Apraxia
- Memory impairment
- Inattention
Peripheral Nervous System
- Axonal sensorimotor neuropathy (in some patients)
MISCELLANEOUS
- Adult onset (range 37-71 years)
- Slowly progressive
- One patient with childhood onset has been reported (last curated December 2022)
MOLECULAR BASIS
- Caused by mutation in the neuronal pentraxin 1 gene (NPTX1, 602367.0001)
Spinocerebellar ataxia - PS164400 - 48 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.33 Spinocerebellar ataxia 21 AD 3 607454 TMEM240 616101
1p35.2 Spinocerebellar ataxia 47 AD 3 617931 PUM1 607204
1p32.2-p32.1 Spinocerebellar ataxia 37 AD 3 615945 DAB1 603448
1p13.2 Spinocerebellar ataxia 19 AD 3 607346 KCND3 605411
2p16.1 Spinocerebellar ataxia 25 AD 3 608703 PNPT1 610316
3p26.1 Spinocerebellar ataxia 15 AD 3 606658 ITPR1 147265
3p26.1 Spinocerebellar ataxia 29, congenital nonprogressive AD 3 117360 ITPR1 147265
3p14.1 Spinocerebellar ataxia 7 AD 3 164500 ATXN7 607640
3q25.2 ?Spinocerebellar ataxia 43 AD 3 617018 MME 120520
4q27 ?Spinocerebellar ataxia 41 AD 3 616410 TRPC3 602345
4q34.3-q35.1 ?Spinocerebellar ataxia 30 AD 2 613371 SCA30 613371
5q32 Spinocerebellar ataxia 12 AD 3 604326 PPP2R2B 604325
5q33.1 Spinocerebellar ataxia 45 AD 3 617769 FAT2 604269
6p22.3 Spinocerebellar ataxia 1 AD 3 164400 ATXN1 601556
6p12.1 Spinocerebellar ataxia 38 AD 3 615957 ELOVL5 611805
6q14.1 Spinocerebellar ataxia 34 AD 3 133190 ELOVL4 605512
6q24.3 Spinocerebellar ataxia 44 AD 3 617691 GRM1 604473
6q27 Spinocerebellar ataxia 17 AD 3 607136 TBP 600075
7q21.2 ?Spinocerebellar ataxia 49 AD 3 619806 SAMD9L 611170
7q22-q32 Spinocerebellar ataxia 18 AD 2 607458 SCA18 607458
7q32-q33 Spinocerebellar ataxia 32 AD 2 613909 SCA32 613909
11q12 Spinocerebellar ataxia 20 AD 4 608687 SCA20 608687
11q13.2 Spinocerebellar ataxia 5 AD 3 600224 SPTBN2 604985
12q24.12 {Amyotrophic lateral sclerosis, susceptibility to, 13} AD 3 183090 ATXN2 601517
12q24.12 Spinocerebellar ataxia 2 AD 3 183090 ATXN2 601517
13q21 Spinocerebellar ataxia 8 AD 3 608768 ATXN8 613289
13q21.33 Spinocerebellar ataxia 8 AD 3 608768 ATXN8OS 603680
13q33.1 Spinocerebellar ataxia 27B, late-onset AD 3 620174 FGF14 601515
13q33.1 Spinocerebellar ataxia 27A AD 3 193003 FGF14 601515
14q32.11-q32.12 ?Spinocerebellar ataxia 40 AD 3 616053 CCDC88C 611204
14q32.12 Machado-Joseph disease AD 3 109150 ATXN3 607047
15q15.2 Spinocerebellar ataxia 11 AD 3 604432 TTBK2 611695
16p13.3 Spinocerebellar ataxia 48 AD 3 618093 STUB1 607207
16q21 Spinocerebellar ataxia 31 AD 3 117210 BEAN1 612051
16q22.2-q22.3 Spinocerebellar ataxia 4 AD 3 600223 ZFHX3 104155
17q21.33 Spinocerebellar ataxia 42 AD 3 616795 CACNA1G 604065
17q25.3 Spinocerebellar ataxia 50 AD 3 620158 NPTX1 602367
18p11.21 Spinocerebellar ataxia 28 AD 3 610246 AFG3L2 604581
19p13.3 ?Spinocerebellar ataxia 26 AD 3 609306 EEF2 130610
19p13.13 Spinocerebellar ataxia 6 AD 3 183086 CACNA1A 601011
19q13.2 ?Spinocerebellar ataxia 46 AD 3 617770 PLD3 615698
19q13.33 Spinocerebellar ataxia 13 AD 3 605259 KCNC3 176264
19q13.42 Spinocerebellar ataxia 14 AD 3 605361 PRKCG 176980
20p13 Spinocerebellar ataxia 23 AD 3 610245 PDYN 131340
20p13 Spinocerebellar ataxia 35 AD 3 613908 TGM6 613900
20p13 Spinocerebellar ataxia 36 AD 3 614153 NOP56 614154
22q13.31 Spinocerebellar ataxia 10 AD 3 603516 ATXN10 611150
Not Mapped Spinocerebellar ataxia 9 612876 SCA9 612876

TEXT

A number sign (#) is used with this entry because of evidence that spinocerebellar ataxia-50 (SCA50) is caused by heterozygous mutation in the NPTX1 gene (602367) on chromosome 17q25.


Description

Spinocerebellar ataxia-50 (SCA50) is an autosomal dominant neurologic disorder characterized by cerebellar ataxia, oculomotor apraxia and other eye movement abnormalities, and cerebellar atrophy on brain imaging. Most patients develop symptoms as adults, although childhood onset has rarely been reported. Additional more variable features may include tremor, dysarthria, dysphagia, and cognitive impairment with executive dysfunction (Coutelier et al., 2022; Schoggl et al., 2022).


Clinical Features

Coutelier et al. (2022) reported a large multigenerational family (AAD271) in which 9 individuals had adult-onset cerebellar ataxia. Subsequently, 7 patients from 5 additional families with a similar phenotype were identified. The mean age at symptom onset was 50.7 years (range 34 to 71) and the disorder was slowly progressive. The predominant features were cerebellar ataxia and ocular signs such as horizontal nystagmus, oculomotor apraxia, diplopia, and abnormal saccadic movements. Most patients had variable additional neurologic features, including tremor, myoclonus, chorea, dystonia, hearing loss, and migraine. Pyramidal signs were not observed. Four patients had decreased vibration sense at the ankles, including 2 with electrophysiologic evidence of a peripheral axonal sensorimotor polyneuropathy. A subset of patients studied showed cognitive deficits manifest as dysexecutive syndrome, memory impairment, attention deficit, and apraxia. Brain imaging, when performed, showed mild cerebellar atrophy occasionally complicated by white matter hyperintensities.

Helmchen et al. (2022) studied a 58-year-old woman from one of the families reported by Coutelier et al. (2022) (family LUEB01) who presented with visual symptoms consistent with oculomotor apraxia at 43 years of age. Her visual disturbances were progressive and severe, with an inability to initiate horizontal saccades or smooth pursuit eye movements. She did not have nystagmus or oculomotor cerebellar signs. Functional MRI studies showed abnormally reduced structural connectivity within the defined oculomotor network of each hemisphere (intrahemispheric dysfunction). These studies indicated a bilateral but ipsi-hemispheric oculomotor network disorder involving the frontal eye fields (FEF).

Deppe et al. (2022) reported a man who presented with cerebellar ataxia and dysarthria at 47 years of age. The disorder was slowly progressive, and he developed dysphagia, choreiform dyskinesias, and oculomotor apraxia. He also had moderate cognitive impairment with executive dysfunction, attention deficits, and impaired working memory. Brain imaging showed cerebellar atrophy.

Clinical Variability

Schoggl et al. (2022) reported a 6-year-old girl, born of unrelated parents, who presented with irritability and unsteadiness at 21 months of age after normal early development. At age 2, she had truncal and limb ataxia with an inability to walk and loss of acquired speech. Brain imaging showed cerebellar atrophy. At age 6, she developed generalized epileptic seizures. The authors emphasized the early symptom onset in this patient.


Inheritance

The transmission pattern of SCA50 in the families reported by Coutelier et al. (2022) was consistent with autosomal dominant inheritance.


Molecular Genetics

In affected members of 6 unrelated families with SCA50, Coutelier et al. (2022) identified 2 different heterozygous missense mutations in the NPTX1 gene (G389R, 602367.0001 and E327G, 602367.0002). The mutations, which were found by exome sequencing or targeted sequencing, segregated with the disorder in families with available data. Neither were present in the gnomAD database. Five families carried the G389R mutation, although haplotype analysis excluded a founder effect. The mutant proteins localized to the ER when expressed in COS7 cells, but both caused abnormal and aggregated ER morphologies and hyperplasia of the ER with swollen cisternae, although there were some cytologic differences between the variants. These changes were associated with activation of the ER unfolded protein response (UPR), as evidenced by translocation of ATF6 (605537) to the nucleus and increased cell death. Additional studies indicated that the G389R variant likely resulted in a loss-of-function effect, whereas E327G disrupted NPTX1 secretion and multimerization in a dominant-negative manner. However, both mutations were predicted to result in ER stress, activation of the UPR, and a decrease in cellular viability.

In a man who had onset of SCA50 at age 47 years, Deppe et al. (2022) identified a de novo heterozygous missense mutation in the NPTX1 gene (R143L; 602367.0003). The mutation, which was found by trio-based exome sequencing, was not present in the gnomAD database. Functional studies of the variant and studies of patient cells were not performed, but molecular modeling suggested that the mutation could result in protein misfolding and possible aggregation of dysfunctional multimers.

In a 6-year-old girl, born of unrelated parents, who developed symptoms of SCA50 at 21 months of age, Schoggl et al. (2022) identified a de novo heterozygous missense mutation affecting the pentraxin domain of the NPTX1 gene (Q370R; 602367.0004). The mutation, which was found by exome sequencing and confirmed by Sanger sequencing, was not present in the gnomAD database. Functional studies of the variant and studies of patient cells were not performed.


Nomenclature

See SCA27B (620174) for a form of SCA that had been designated SCA50 in a publication.


REFERENCES

  1. Coutelier, M., Jacoupy, M., Janer, A., Renaud, F., Auger, N., Saripella, G.-V., Ancien, F., Pucci, F., Rooman, M., Gilis, D., Lariviere, R., Sgarioto, N., and 17 others. NPTX1 mutations trigger endoplasmic reticulum stress and cause autosomal dominant cerebellar ataxia. Brain 145: 1519-1534, 2022. [PubMed: 34788392, related citations] [Full Text]

  2. Deppe, J., Deininger, N., Lingor, P., Haack, T. B., Haslinger, B., Deschauer, M. A novel NPTX1 de novo variant in a late-onset ataxia patient. Mov. Disord. 37: 1319-1321, 2022. [PubMed: 35285082, related citations] [Full Text]

  3. Helmchen, C., Koch, P. J., Girard, G., Bruggemann, N., Machner, B., Sprenger, A. NPTX1-related oculomotor apraxia: an intra-hemispheric disconnection disorder. J. Neurol. 269: 3931-3936, 2022. [PubMed: 35288776, images, related citations] [Full Text]

  4. Schoggl, J., Siegert, S., Boltshauser, E., Freilinger, M., Schmidt, W. M. A de novo missense NPTX1 variant in an individual with infantile-onset cerebellar ataxia. Mov. Disord. 37: 1774-1776, 2022. [PubMed: 35560436, related citations] [Full Text]


Creation Date:
Cassandra L. Kniffin : 12/13/2022
carol : 03/13/2023
alopez : 12/20/2022
ckniffin : 12/15/2022

# 620158

SPINOCEREBELLAR ATAXIA 50; SCA50


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
17q25.3 Spinocerebellar ataxia 50 620158 Autosomal dominant 3 NPTX1 602367

TEXT

A number sign (#) is used with this entry because of evidence that spinocerebellar ataxia-50 (SCA50) is caused by heterozygous mutation in the NPTX1 gene (602367) on chromosome 17q25.


Description

Spinocerebellar ataxia-50 (SCA50) is an autosomal dominant neurologic disorder characterized by cerebellar ataxia, oculomotor apraxia and other eye movement abnormalities, and cerebellar atrophy on brain imaging. Most patients develop symptoms as adults, although childhood onset has rarely been reported. Additional more variable features may include tremor, dysarthria, dysphagia, and cognitive impairment with executive dysfunction (Coutelier et al., 2022; Schoggl et al., 2022).


Clinical Features

Coutelier et al. (2022) reported a large multigenerational family (AAD271) in which 9 individuals had adult-onset cerebellar ataxia. Subsequently, 7 patients from 5 additional families with a similar phenotype were identified. The mean age at symptom onset was 50.7 years (range 34 to 71) and the disorder was slowly progressive. The predominant features were cerebellar ataxia and ocular signs such as horizontal nystagmus, oculomotor apraxia, diplopia, and abnormal saccadic movements. Most patients had variable additional neurologic features, including tremor, myoclonus, chorea, dystonia, hearing loss, and migraine. Pyramidal signs were not observed. Four patients had decreased vibration sense at the ankles, including 2 with electrophysiologic evidence of a peripheral axonal sensorimotor polyneuropathy. A subset of patients studied showed cognitive deficits manifest as dysexecutive syndrome, memory impairment, attention deficit, and apraxia. Brain imaging, when performed, showed mild cerebellar atrophy occasionally complicated by white matter hyperintensities.

Helmchen et al. (2022) studied a 58-year-old woman from one of the families reported by Coutelier et al. (2022) (family LUEB01) who presented with visual symptoms consistent with oculomotor apraxia at 43 years of age. Her visual disturbances were progressive and severe, with an inability to initiate horizontal saccades or smooth pursuit eye movements. She did not have nystagmus or oculomotor cerebellar signs. Functional MRI studies showed abnormally reduced structural connectivity within the defined oculomotor network of each hemisphere (intrahemispheric dysfunction). These studies indicated a bilateral but ipsi-hemispheric oculomotor network disorder involving the frontal eye fields (FEF).

Deppe et al. (2022) reported a man who presented with cerebellar ataxia and dysarthria at 47 years of age. The disorder was slowly progressive, and he developed dysphagia, choreiform dyskinesias, and oculomotor apraxia. He also had moderate cognitive impairment with executive dysfunction, attention deficits, and impaired working memory. Brain imaging showed cerebellar atrophy.

Clinical Variability

Schoggl et al. (2022) reported a 6-year-old girl, born of unrelated parents, who presented with irritability and unsteadiness at 21 months of age after normal early development. At age 2, she had truncal and limb ataxia with an inability to walk and loss of acquired speech. Brain imaging showed cerebellar atrophy. At age 6, she developed generalized epileptic seizures. The authors emphasized the early symptom onset in this patient.


Inheritance

The transmission pattern of SCA50 in the families reported by Coutelier et al. (2022) was consistent with autosomal dominant inheritance.


Molecular Genetics

In affected members of 6 unrelated families with SCA50, Coutelier et al. (2022) identified 2 different heterozygous missense mutations in the NPTX1 gene (G389R, 602367.0001 and E327G, 602367.0002). The mutations, which were found by exome sequencing or targeted sequencing, segregated with the disorder in families with available data. Neither were present in the gnomAD database. Five families carried the G389R mutation, although haplotype analysis excluded a founder effect. The mutant proteins localized to the ER when expressed in COS7 cells, but both caused abnormal and aggregated ER morphologies and hyperplasia of the ER with swollen cisternae, although there were some cytologic differences between the variants. These changes were associated with activation of the ER unfolded protein response (UPR), as evidenced by translocation of ATF6 (605537) to the nucleus and increased cell death. Additional studies indicated that the G389R variant likely resulted in a loss-of-function effect, whereas E327G disrupted NPTX1 secretion and multimerization in a dominant-negative manner. However, both mutations were predicted to result in ER stress, activation of the UPR, and a decrease in cellular viability.

In a man who had onset of SCA50 at age 47 years, Deppe et al. (2022) identified a de novo heterozygous missense mutation in the NPTX1 gene (R143L; 602367.0003). The mutation, which was found by trio-based exome sequencing, was not present in the gnomAD database. Functional studies of the variant and studies of patient cells were not performed, but molecular modeling suggested that the mutation could result in protein misfolding and possible aggregation of dysfunctional multimers.

In a 6-year-old girl, born of unrelated parents, who developed symptoms of SCA50 at 21 months of age, Schoggl et al. (2022) identified a de novo heterozygous missense mutation affecting the pentraxin domain of the NPTX1 gene (Q370R; 602367.0004). The mutation, which was found by exome sequencing and confirmed by Sanger sequencing, was not present in the gnomAD database. Functional studies of the variant and studies of patient cells were not performed.


Nomenclature

See SCA27B (620174) for a form of SCA that had been designated SCA50 in a publication.


REFERENCES

  1. Coutelier, M., Jacoupy, M., Janer, A., Renaud, F., Auger, N., Saripella, G.-V., Ancien, F., Pucci, F., Rooman, M., Gilis, D., Lariviere, R., Sgarioto, N., and 17 others. NPTX1 mutations trigger endoplasmic reticulum stress and cause autosomal dominant cerebellar ataxia. Brain 145: 1519-1534, 2022. [PubMed: 34788392] [Full Text: https://doi.org/10.1093/brain/awab407]

  2. Deppe, J., Deininger, N., Lingor, P., Haack, T. B., Haslinger, B., Deschauer, M. A novel NPTX1 de novo variant in a late-onset ataxia patient. Mov. Disord. 37: 1319-1321, 2022. [PubMed: 35285082] [Full Text: https://doi.org/10.1002/mds.28985]

  3. Helmchen, C., Koch, P. J., Girard, G., Bruggemann, N., Machner, B., Sprenger, A. NPTX1-related oculomotor apraxia: an intra-hemispheric disconnection disorder. J. Neurol. 269: 3931-3936, 2022. [PubMed: 35288776] [Full Text: https://doi.org/10.1007/s00415-022-11057-3]

  4. Schoggl, J., Siegert, S., Boltshauser, E., Freilinger, M., Schmidt, W. M. A de novo missense NPTX1 variant in an individual with infantile-onset cerebellar ataxia. Mov. Disord. 37: 1774-1776, 2022. [PubMed: 35560436] [Full Text: https://doi.org/10.1002/mds.29054]


Creation Date:
Cassandra L. Kniffin : 12/13/2022

Edit History:
carol : 03/13/2023
alopez : 12/20/2022
ckniffin : 12/15/2022



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