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Case Reports

Zika virus infection, Philippines, 2012

Maria Theresa Alera et al. Emerg Infect Dis. 2015 Apr.
No abstract available

Keywords: Philippines; Zika virus; phylogeny; viruses.

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Figures

Figure
Figure
Maximum-likelihood phylogenetic tree of fragments of Zika virus was determined using the general time-reversible plus gamma distribution plus invariable site model with 13 reference Zika virus strains from GenBank. The contig sequence, obtained from de novo assembly and blastn (http://blast.ncbi.nlm.nih.gov/Blast.cgi?PROGRAM=blastn&PAGE_TYPE=BlastSearch&LINK_LOC=blasthome), of the Philippines isolate from 2012 (GenBank accession no. KM851038; bold font) was analyzed against 8 reference strains from Africa (GenBank accession nos. KF268948, KF268949, KF268950, LC002520, AY632535, NC012532, HQ234500, HQ234501) and 5 reference strains from Asia (GenBank accession nos. KJ776791, JN860885, EU545988, HQ234499, KF993678). The year of collection is unknown for several strains from Africa. Bootstrap values >70 are indicated at nodes. Scale bar indicates nucleotide substitutions per site. The drawing is not to scale.
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Comment in

  • Zika Virus Infection, Philippines, 2012.
    Buerano CC, Pangilinan LS, Dimamay MTA, Mapua CA, Dimamay MPS, Matias RR, Natividad FF, de Guzman Daroy ML, Hasebe F, Morita K, Moi ML. Buerano CC, et al. Emerg Infect Dis. 2020 Sep;26(9):2300-2301. doi: 10.3201/eid2609.190896. Emerg Infect Dis. 2020. PMID: 32818418 Free PMC article. No abstract available.

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