Dynamics and function of DNA methylation in plants
- PMID: 29784956
- DOI: 10.1038/s41580-018-0016-z
Dynamics and function of DNA methylation in plants
Abstract
DNA methylation is a conserved epigenetic modification that is important for gene regulation and genome stability. Aberrant patterns of DNA methylation can lead to plant developmental abnormalities. A specific DNA methylation state is an outcome of dynamic regulation by de novo methylation, maintenance of methylation and active demethylation, which are catalysed by various enzymes that are targeted by distinct regulatory pathways. In this Review, we discuss DNA methylation in plants, including methylating and demethylating enzymes and regulatory factors, and the coordination of methylation and demethylation activities by a so-called methylstat mechanism; the functions of DNA methylation in regulating transposon silencing, gene expression and chromosome interactions; the roles of DNA methylation in plant development; and the involvement of DNA methylation in plant responses to biotic and abiotic stress conditions.
Similar articles
-
Regulatory link between DNA methylation and active demethylation in Arabidopsis.Proc Natl Acad Sci U S A. 2015 Mar 17;112(11):3553-7. doi: 10.1073/pnas.1502279112. Epub 2015 Mar 2. Proc Natl Acad Sci U S A. 2015. PMID: 25733903 Free PMC article.
-
siRNA-mediated chromatin maintenance and its function in Arabidopsis thaliana.Biochim Biophys Acta. 2011 Aug;1809(8):444-51. doi: 10.1016/j.bbagrm.2011.05.002. Epub 2011 May 13. Biochim Biophys Acta. 2011. PMID: 21605714 Review.
-
[Advances in research on the mechanism of DNA methylation in plants].Sheng Wu Gong Cheng Xue Bao. 2020 May 25;36(5):838-848. doi: 10.13345/j.cjb.190373. Sheng Wu Gong Cheng Xue Bao. 2020. PMID: 32567267 Review. Chinese.
-
Epigenetic inheritance in plants.Nature. 2007 May 24;447(7143):418-24. doi: 10.1038/nature05917. Nature. 2007. PMID: 17522675 Review.
-
RNAi-independent de novo DNA methylation revealed in Arabidopsis mutants of chromatin remodeling gene DDM1.Plant J. 2012 Jun;70(5):750-8. doi: 10.1111/j.1365-313X.2012.04911.x. Epub 2012 Mar 6. Plant J. 2012. PMID: 22269081
Cited by
-
Epigenetic differences between wild and cultivated grapevines highlight the contribution of DNA methylation during crop domestication.BMC Plant Biol. 2024 Jun 6;24(1):504. doi: 10.1186/s12870-024-05197-z. BMC Plant Biol. 2024. PMID: 38840239 Free PMC article.
-
A conserved Pol II elongator SPT6L mediates Pol V transcription to regulate RNA-directed DNA methylation in Arabidopsis.Nat Commun. 2024 May 25;15(1):4460. doi: 10.1038/s41467-024-48940-8. Nat Commun. 2024. PMID: 38796517 Free PMC article.
-
DNA Methylation Analysis of Growth Differences between Upright and Inverted Cuttings of Populus yunnanensis.Int J Mol Sci. 2024 May 7;25(10):5096. doi: 10.3390/ijms25105096. Int J Mol Sci. 2024. PMID: 38791136 Free PMC article.
-
Exogenous application of 5-azacitidin, royal jelly and folic acid regulate plant redox state, expression level of DNA methyltransferases and alleviate adverse effects of salinity stress on Vicia faba L. plants.Heliyon. 2024 May 11;10(10):e30934. doi: 10.1016/j.heliyon.2024.e30934. eCollection 2024 May 30. Heliyon. 2024. PMID: 38784551 Free PMC article.
-
DNA methylation analysis of floral parts revealed dynamic changes during the development of homostylous Fagopyrum tataricum and heterostylous F. esculentum flowers.BMC Plant Biol. 2024 May 23;24(1):448. doi: 10.1186/s12870-024-05162-w. BMC Plant Biol. 2024. PMID: 38783206 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources