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HscfrAKR/J
QTL Variant Detail
Summary
QTL variant: HscfrAKR/J
Name: hematopoietic stem cell frequency regulator; AKR/J
MGI ID: MGI:2665083
QTL: Hscfr  Location: unknown  Genetic Position: Chr17, cM position of peak correlated region/allele: 23.5 cM
QTL Note: genome coordinates based on the marker associated with the peak LOD score
Variant
origin
Strain of Specimen:  AKR/J
Variant
description
Allele Type:    QTL
Mutation:    Undefined
    This allele confers increased hematopoietic stem cell frequencies compared to C57BL/6Ka. (J:73737)
Phenotypes
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View phenotypes and curated references for all genotypes (concatenated display).
Notes

Mapping and Phenotype information for this QTL, its variants and associated markers

J:73737

Interval mapping was performed on phenotypically extreme animals from a (C57BL/6Ka-Thy1 x AKR/J)F2 intercross to identify QTLs associated with hematopoietic stem cell (HSC) regulation. Parental strain AKR/J exhibits a higher number of long-term reconstituting HSCs compared to parental strain C57BL/Ka-Thy1. A significant locus mapped to approximately 20 cM on mouse Chromosome 17 and is named Hscfr (hematopoietic stem cell frequency regulator). The QTL interval of Hscfr spans 9.8 cM to 33.8 cM, and the peakLOD score is 4.85 at D17Mit65 and D17Mit66. The AKR/J-derived allele is associated with increased HSC frequencies. When an AKR/J-derived region of Hscfr from D7Mit31 to D17Mit87 was bred onto a C57BL/6 background the phenotype was lost. Authors conclude that Hscfr alone is not sufficient to increase HSCs on a C57BL/6 background. Potential candidate genes for Hscfr are Notch3 and Notch4.

References
Original:  J:73737 Morrison SJ, et al., A genetic determinant that specifically regulates the frequency of hematopoietic stem cells. J Immunol. 2002 Jan 15;168(2):635-42
All:  1 reference(s)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
07/02/2024
MGI 6.13
The Jackson Laboratory

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