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Report for CCDS16787.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
16787.1 |
Public |
Mus musculus |
2 |
Plcb1 |
23 |
108 |
98 |
![CCDS History](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-History.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![NCBI Gene:18795](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Gene.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:16787.1](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Cquery.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:18795](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Gquery.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![See the combined annotation on chromosome 2 in Sequence Viewer](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-SeqViewer.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 16787.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
![Current member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000070724.11 |
ENSMUSP00000064844.5 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000070724.11](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000064844.5](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Protein.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000070724](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000064844](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Pquery.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) |
![Original member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
![Current member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000131552.4 |
ENSMUSP00000118756.2 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000131552.4](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000118756.2](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Protein.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000131552](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000118756](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Pquery.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) |
![Original member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
![Current member](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Check.jpg) |
NCBI |
NM_019677.2 |
NP_062651.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_019677.2](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_062651.2](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Protein.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_019677](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_062651](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-Pquery.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) ![Link to BLAST:NP_062651.2](https://www.ncbi.nlm.nih.gov/CCDS/IMG/ccds-BLAST.jpg) ![](https://www.ncbi.nlm.nih.gov/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_062651.2 |
1173 |
Q9Z1B3-2 |
1173 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 16787.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3522 nt): ATGGCTGGGGCTCAGCCCGGAGTGCACGCCTTGCAACTCAAGCCCGTGTGCGTGTCCGACAGCCTCAAGA AGGGCACCAAATTCGTCAAGTGGGATGATGACTCCACTATTGTTACTCCAATTATTTTGAGGACTGATCC TCAGGGATTTTTCTTTTACTGGACAGACCAGAATAAGGAGACGGAGCTGTTAGATCTCAGCCTTGTCAAG GATGCCAGGTGTGGGAAGCACGCCAAAGCTCCCAAGGACCCCAAGTTGCGTGAACTTCTGGATGTTGGGA ACATCGGACACTTGGAACAGCGCATGATAACTGTGGTGTATGGACCAGACCTGGTGAACATTTCCCACTT GAATCTTGTGGCTTTTCAAGAGGAAGTAGCCAAGGAATGGACAAATGAGGTTTTCAGCTTGGCAACAAAC CTGCTGGCTCAGAACATGTCCAGGGACGCATTTCTGGAGAAAGCATATACTAAGCTCAAGCTCCAGGTCA CCCCAGAAGGCCGCATTCCTCTTAAAAACATCTATCGATTGTTCTCAGCAGACCGGAAGCGCGTTGAAAC TGCACTAGAGGCTTGTAGTCTTCCATCTTCGAGGAATGACTCCATTCCCCAAGAGGACTTCACTCCAGAT GTATACAGAGTTTTCCTGAACAATCTCTGTCCCCGACCTGAAATTGATAACATCTTTTCTGAATTTGGTG CCAAAAGCAAACCGTACCTGACGGTTGATCAGATGATGGATTTTATCAACCTTAAGCAGAGAGATCCCCG GCTCAATGAAATCCTTTACCCACCTCTGAAGCAGGAGCAGGTCCAAGTGTTGATTGAGAAATATGAGCCC AACAGCAGCCTCGCCAAGAAAGGGCAGATGTCAGTGGATGGATTCATGCGCTACCTGAGCGGAGAAGAAA ATGGAGTCGTTTCACCTGAGAAACTGGATTTGAACGAAGACATGTCTCAGCCCCTGTCTCACTATTTCAT CAATTCCTCGCACAACACCTACCTCACAGCTGGCCAGTTGGCTGGGAACTCGTCTGTAGAGATGTATCGC CAGGTGCTTCTGTCTGGATGTCGCTGTGTGGAGCTGGACTGCTGGAAGGGAAGGACCGCTGAGGAAGAGC CTGTCATTACCCATGGATTCACCATGACAACAGAAATATCCTTCAAGGAAGTCATAGAAGCCATCGCAGA GTGTGCGTTCAAGACGTCTCCTTTCCCCATCCTCCTTTCCTTTGAGAACCACGTGGATTCCCCGAAGCAA CAAGCCAAGATGGCCGAGTATTGCCGATTAATCTTTGGTGATGCCCTCCTGATGGAACCACTGGAAAAAT ACCCACTGGAATCTGGGGTACCTCTTCCAAGCCCTATGGATTTAATGTATAAAATCTTGGTGAAAAACAA GAAGAAGTCGCACAAGTCGTCAGAGGGAAGTGGTAAGAAGAAGCTTTCAGAGCAAGCTTCCAACACCTAC AGCGACTCCTCCAGTGTGTTCGAGCCTTCGTCTCCAGGAGCTGGGGAAGCAGATACGGAGAGTGATGACG ATGACGACGACGATGACTGTAAAAAGTCTTCCATGGATGAGGGGACAGCTGGCAGCGAAGCCATGGCCAC AGAAGAGATGTCTAACCTGGTGAACTATATTCAGCCTGTCAAGTTTGAGTCCTTTGAAATTTCAAAAAAA AGAAATAAAAGCTTTGAAATGTCTTCCTTCGTGGAAACCAAAGGACTTGAACAACTTACAAAGTCTCCGG TGGAATTTGTAGAATACAACAAGATGCAACTTAGCAGGATATATCCCAAGGGAACACGTGTGGATTCATC CAACTACATGCCTCAACTCTTCTGGAATGCTGGCTGTCAGATGGTGGCGCTCAACTTCCAGACAGTGGAT CTAGCTATGCAGATAAACATGGGCATGTATGAGTACAATGGGAAGAGCGGCTATAGGCTGAAGCCAGAGT TCATGAGGAGGCCGGACAAGCATTTTGATCCATTTACTGAAGGAATCGTAGATGGGATAGTGGCCAACAC TCTATCTGTTAAGATTATTTCAGGTCAGTTCCTCTCTGATAAGAAAGTTGGGACTTATGTGGAAGTGGAT ATGTTTGGCTTGCCTGTGGACACAAGGAGGAAGGCATTTAAAACCAAGACATCCCAAGGAAATGCTGTAA ACCCTGTCTGGGAAGAAGAACCTATTGTATTCAAAAAGGTAGTTCTACCTTCTCTGGCCTGTTTGAGGAT AGCAGCATATGAAGAGGGAGGCAAATTTATTGGCCACCGGATATTGCCTGTGCAGGCTATTCGGCCAGGC TATCACTACATCTGCCTGCGGAATGAGAGGAACCAGCCCCTGACGCTGCCAGCTGTCTTTGTCTACATAG AAGTCAAAGATTATGTGCCAGACACGTATGCAGATGTAATCGAAGCTCTATCAAACCCAATCCGATATGT CAATCTGATGGAACAGAGAGCTAAGCAGCTGGCTGCGTTGACCCTGGAGGATGAAGAGGAAGTAAAGAAG GAGGCTGACCCTGGAGAAACATCTTCCGAGGCTCCAAGCGAAACCAGGACAACGCCAGCAGAGAATGGGG TGAATCACACCGCATCCCTTGCACCCAAGCCGCCTTCCCAGGCTCCACACAGCCAGCCTGCTCCAGGGTC TGTGAAGGCACCTGCCAAAACAGAAGATCTGATCCAGAGCGTGTTAACAGAAGTAGAGGCGCAAACCATC GAAGAGCTCAAGCAACAGAAATCGTTCGTGAAACTTCAAAAGAAACACTACAAAGAAATGAAAGACCTGG TGAAGAGACACCACAAGAAAACCACGGAGCTCATTAAGGAGCACACGACCAAGTACAACGAGATTCAGAA TGACTACCTGAGAAGGAGGGCAGCCTTGGAGAAGTCCGCCAAAAAGGACAGCAAGAAGAAATCTGAACCC AGCAGCCCTGACCACGGCTCATCAGCCATTGAGCAAGACCTCGCTGCCCTGGATGCAGAAATGACTCAGA AGTTGATAGACTTGAAAGACAAGCAACAACAGCAGCTGCTTAATCTTCGGCAAGAGCAGTATTACAGCGA GAAGTACCAAAAGCGAGAACACATTAAACTGCTTATTCAGAAGTTGACAGATGTTGCAGAAGAGTGTCAG AACAATCAGTTAAAGAAGCTGAAGGAAATCTGCGAGAAAGAGAAGAAGGAATTAAAGAAGAAAATGGATA AGAAGAGGCAAGAGAAGATAACAGAAGCCAAGTCCAAAGACAAAAGCCAGATGGAAGAGGAGAAGACAGA GATGATCCGATCGTACATCCAGGAGGTGGTTCAGTACATCAAGAGGTTAGAGGAAGCACAAAGTAAAAGA CAAGAAAAACTCGTGGAGAAACACAATGAGATCCGCCAGCAGATCCTCGATGAGAAGCCCAAGGGGGAAG GCCCCTCCTCAGTCTTGTCGGAAGGTTGCCATGAGGATCCCTCTGTTCCCCCCAACTTTACTCCCCCCAA CCCTCAAGCTCTCAAGTGGTGA
Translation (1173 aa): MAGAQPGVHALQLKPVCVSDSLKKGTKFVKWDDDSTIVTPIILRTDPQGFFFYWTDQNKETELLDLSLVK DARCGKHAKAPKDPKLRELLDVGNIGHLEQRMITVVYGPDLVNISHLNLVAFQEEVAKEWTNEVFSLATN LLAQNMSRDAFLEKAYTKLKLQVTPEGRIPLKNIYRLFSADRKRVETALEACSLPSSRNDSIPQEDFTPD VYRVFLNNLCPRPEIDNIFSEFGAKSKPYLTVDQMMDFINLKQRDPRLNEILYPPLKQEQVQVLIEKYEP NSSLAKKGQMSVDGFMRYLSGEENGVVSPEKLDLNEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYR QVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEAIAECAFKTSPFPILLSFENHVDSPKQ QAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHKSSEGSGKKKLSEQASNTY SDSSSVFEPSSPGAGEADTESDDDDDDDDCKKSSMDEGTAGSEAMATEEMSNLVNYIQPVKFESFEISKK RNKSFEMSSFVETKGLEQLTKSPVEFVEYNKMQLSRIYPKGTRVDSSNYMPQLFWNAGCQMVALNFQTVD LAMQINMGMYEYNGKSGYRLKPEFMRRPDKHFDPFTEGIVDGIVANTLSVKIISGQFLSDKKVGTYVEVD MFGLPVDTRRKAFKTKTSQGNAVNPVWEEEPIVFKKVVLPSLACLRIAAYEEGGKFIGHRILPVQAIRPG YHYICLRNERNQPLTLPAVFVYIEVKDYVPDTYADVIEALSNPIRYVNLMEQRAKQLAALTLEDEEEVKK EADPGETSSEAPSETRTTPAENGVNHTASLAPKPPSQAPHSQPAPGSVKAPAKTEDLIQSVLTEVEAQTI EELKQQKSFVKLQKKHYKEMKDLVKRHHKKTTELIKEHTTKYNEIQNDYLRRRAALEKSAKKDSKKKSEP SSPDHGSSAIEQDLAALDAEMTQKLIDLKDKQQQQLLNLRQEQYYSEKYQKREHIKLLIQKLTDVAEECQ NNQLKKLKEICEKEKKELKKKMDKKRQEKITEAKSKDKSQMEEEKTEMIRSYIQEVVQYIKRLEEAQSKR QEKLVEKHNEIRQQILDEKPKGEGPSSVLSEGCHEDPSVPPNFTPPNPQALKW
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