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Definitions for Error

Type Member of File Line
function /compilers/vs2019/check.sh 29
function /compilers/vs2022/check.sh 29
function /compilers/xcode30_prj/configure 210
function prototype or declaration CNcbiDiag /include/corelib/ncbidiag.hpp 1047
function definition /include/corelib/ncbidiag.inl 432
function definition /include/corelib/ncbiexpt.hpp 1197
function prototype or declaration mu::ParserBase /include/gui/utils/muparser/muParserBase.h 184
function prototype or declaration mu::ParserTokenReader /include/gui/utils/muparser/muParserTokenReader.h 123
macro (un)definition /include/objtools/import/import_error.hpp 40
enumerator CImportError::ErrorLevel /include/objtools/import/import_error.hpp 54
macro (un)definition /include/objtools/import/import_progress.hpp 40
function definition /include/objtools/pubseq_gateway/impl/cassandra/cass_blob_op.hpp 288
function prototype or declaration CAlnErrorReporter /include/objtools/readers/aln_error_reporter.hpp 107
function prototype or declaration CAlnErrorReporter /include/objtools/readers/aln_error_reporter.hpp 110
function /scripts/common/new_cmake_project.sh 87
function prototype or declaration CInputModel /src/algo/gnomon/hmm.cpp 698
function prototype or declaration CInputModel /src/algo/gnomon/hmm.cpp 772
function prototype or declaration CInputModel /src/algo/gnomon/hmm.cpp 777
function prototype or declaration CInputModel /src/algo/gnomon/hmm.cpp 784
function definition CInputModel /src/algo/gnomon/hmm.hpp 100
enumerator CSrvDiagMsg::ESeverity /src/app/netcache/srv_diag.hpp 83
enumerator EOldStyleSeverity /src/app/netcache/srv_lib.hpp 362
field /src/app/netstorage/nst_db.sql 295
field /src/app/netstorage/nst_db.sql 352
field /src/app/netstorage/nst_db.sql 389
field /src/app/netstorage/nst_db.sql 463
field /src/app/netstorage/nst_db.sql 563
field /src/app/netstorage/nst_db.sql 626
field /src/app/netstorage/nst_db.sql 864
field /src/app/netstorage/nst_db.sql 929
field /src/app/netstorage/nst_db.sql 1151
field /src/app/netstorage/nst_db_1_to_2.sql 87
field /src/app/netstorage/nst_db_1_to_2.sql 130
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 144
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 205
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 275
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 350
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 437
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 494
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 559
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 609
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 655
field /src/app/netstorage/nst_db_2.3_to_2.4.sql 666
field /src/app/netstorage/nst_db_2.4_to_2.5.sql 120
field /src/app/netstorage/nst_db_2.4_to_2.5.sql 159
field /src/app/netstorage/nst_db_2.4_to_2.5.sql 203
field /src/app/netstorage/nst_db_2.4_to_2.5.sql 262
field /src/app/netstorage/nst_db_2.4_to_2.5.sql 321
field /src/app/netstorage/nst_db_2.5_to_2.6.sql 134
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 132
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 211
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 325
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 402
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 449
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 501
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 550
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 622
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 739
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 824
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 932
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1010
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1096
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1175
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1250
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1342
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1424
field /src/app/netstorage/nst_db_2.6_to_2.7.sql 1489
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 198
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 314
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 388
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 466
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 517
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 631
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 816
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 924
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1037
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1143
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1223
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1312
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1391
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1478
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1562
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1633
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1716
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1792
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1856
field /src/app/netstorage/nst_db_2.7_to_3.8.sql 1866
field /src/app/netstorage/nst_db_2_to_2.3.sql 115
field /src/app/netstorage/nst_db_2_to_2.3.sql 167
field /src/app/netstorage/nst_db_3.8_to_4.9.sql 274
field /src/app/netstorage/nst_db_3.8_to_4.9.sql 385
field /src/app/netstorage/nst_db_3.8_to_4.9.sql 395
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 419
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 481
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 559
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 652
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 738
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 810
field /src/app/netstorage/nst_db_4.9_to_5.10.sql 820
field /src/app/netstorage/nst_db_5.10_to_5.11.sql 118
field /src/app/netstorage/nst_db_5.10_to_5.11.sql 266
field /src/app/netstorage/nst_db_5.10_to_5.11.sql 358
field /src/app/netstorage/nst_db_5.10_to_5.11.sql 407
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 180
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 275
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 363
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 457
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 558
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 671
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 752
field /src/app/netstorage/nst_db_5.11_to_6.12.sql 762
field /src/app/netstorage/nst_db_6.12_to_6.13.sql 222
field /src/app/netstorage/nst_db_6.13_to_6.14.sql 125
field /src/app/netstorage/nst_db_6.13_to_6.14.sql 196
field /src/app/netstorage/nst_db_6.14_to_6.15.sql 125
field /src/app/netstorage/nst_db_6.14_to_6.15.sql 189
function definition CHttpReply /src/app/pubseq_gateway/server/http_reply.hpp 294
function /src/build-system/cmake/cmake-cfg-unix.sh 134
function /src/build-system/cmake/cmake-cfg-xcode.sh 104
function /src/check/check.sh 100
function /src/check/check.sh 359
function definition mu::ParserBase /src/gui/utils/muparser/muParserBase.cpp 1253
function definition mu::ParserTokenReader /src/gui/utils/muparser/muParserTokenReader.cpp 829
function prototype or declaration /src/gui/utils/muparser/muParserTokenReader.cpp 833
function /src/misc/clog/app/demo_ncbi_applog.sh 6
function prototype or declaration CNcbiApplogApp /src/misc/clog/app/ncbi_applog.cpp 256
function definition CNcbiApplogApp /src/misc/clog/app/ncbi_applog.cpp 1332
function /src/misc/clog/app/ncbi_applog_run_app.sh 23
function /src/misc/clog/app/test_ncbi_applog.sh 9
function definition CAlnErrorReporter /src/objtools/readers/aln_error_reporter.cpp 76
function definition CAlnErrorReporter /src/objtools/readers/aln_error_reporter.cpp 88
function prototype or declaration /src/objtools/readers/aln_scanner_nexus.cpp 261
function prototype or declaration /src/objtools/readers/seqid_validate.cpp 82

133 declarations in 45 files.

References to Error

File Line
/compilers/unix/Clang.sh 33 45 60
/compilers/unix/GCC.sh 59 73 88
/compilers/unix/ICC.sh 102
/compilers/unix/LLVM-GCC.sh 34 46 61
/compilers/unix/Xcode.sh 28
/compilers/vs2019/build.sh 71
/compilers/vs2019/check.sh 29 38 64 66 74 86 115 132 180 182 201
/compilers/vs2019/dll/third_party_dll_install.mak 14
/compilers/vs2019/static/third_party_static_install.mak 14
/compilers/vs2019/third_party_install.meta.mk 42
/compilers/vs2022/build.sh 71
/compilers/vs2022/check.sh 29 38 64 66 74 86 115 132 180 182 201
/compilers/vs2022/dll/third_party_dll_install.mak 14
/compilers/vs2022/static/third_party_static_install.mak 14
/compilers/vs2022/third_party_install.meta.mk 42
/compilers/xcode30_prj/configure 210 213 257 271 280 341 430
/compilers/xcode30_prj/copybin.sh 36
/compilers/xcode30_prj/copyutl.sh 36
/compilers/xcode30_prj/postbuild.sh 36
/compilers/xcode30_prj/ptb.sh 48 140
/include/corelib/ncbidiag.hpp 1047
/include/corelib/ncbidiag.inl 432
/include/corelib/ncbiexpt.hpp 563 574 631 645 1197
/include/corelib/perf_log.hpp 403 478 487 568
/include/db/bdb/bdb_ext_blob.hpp 441
/include/db/bdb/bdb_split_blob.hpp 210 690 701
/include/gui/objutils/descriptor_change.hpp 93 99 118 127
/include/gui/opengl/glbuffer.hpp 444 626
/include/gui/opengl/glutils.hpp 110 113
/include/gui/utils/muparser/muParserBase.h 184
/include/gui/utils/muparser/muParserTokenReader.h 123
/include/gui/widgets/seq_graphic/alngraphic_ds.hpp 109
/include/gui/widgets/seq_graphic/graph_cache.hpp 107
/include/gui/widgets/seq_graphic/layout_track_proxy.hpp 461
/include/objects/omssa/MSSearchSettings.hpp 68
/include/objmgr/util/indexer.hpp 1050 1074 1098 1119
/include/objtools/import/import_error.hpp 40 54
/include/objtools/import/import_progress.hpp 40
/include/objtools/pubseq_gateway/impl/cassandra/cass_blob_op.hpp 164 167 170 277 288 335 352
/include/objtools/readers/aln_error_reporter.hpp 107 110
/include/util/cache/icache_clean_thread.hpp 66
/include/util/compress/compress.hpp 96 104
/scripts/common/check/check_make_cfg.sh 217
/scripts/common/check/check_make_unix.sh 204
/scripts/common/check/check_make_unix_cmake.sh 227
/scripts/common/impl/create_flat_makefile.sh 54
/scripts/common/impl/if_diff.sh 48
/scripts/common/impl/if_none.sh 33
/scripts/common/impl/install.sh 58
/scripts/common/impl/reconfigure.sh 33
/scripts/common/new_cmake_project.sh 87 92 155 158 161 164 225
/scripts/common/new_project.sh 68
/src/algo/align/mergetree/merge_tree.cpp 834 843
/src/algo/align/ngalign/alignment_scorer.cpp 512 544
/src/algo/align/ngalign/app/ngalign_app.cpp 712 767
/src/algo/align/ngalign/banded_aligner.cpp 210 211 297 305 397 441
/src/algo/align/ngalign/blast_aligner.cpp 162 163 260 271 394 405
/src/algo/align/ngalign/inversion_merge_aligner.cpp 392
/src/algo/align/ngalign/merge_aligner.cpp 193
/src/algo/align/ngalign/result_set.cpp 228
/src/algo/align/ngalign/sequence_set.cpp 200 210
/src/algo/align/ngalign/unordered_spliter.cpp 106 129 142
/src/algo/align/util/align_compare.cpp 765
/src/algo/align/util/align_sort.cpp 338 474 504 541 554 624 629
/src/algo/align/util/demo/demo_genomic_compart.cpp 152 153 166 167 168 169
/src/algo/align/util/patch_sequence.cpp 241 243 460
/src/algo/align/util/tabular_fmt.cpp 3148
/src/algo/align/util/unit_test/score_builder_unit_test.cpp 124 127 130 133 137 214 224 233 253 262 272 293 314 334 356 378 388 394 412
/src/algo/blast/api/blast_dbindex.cpp 684 701 713 733 1010
/src/algo/blast/api/remote_blast.cpp 1675 1687 2518 2524
/src/algo/blast/dbindex/makeindex/mkindex_app.cpp 219 225 255 265 330
/src/algo/blast/dbindex_search/srsearch/srsearch_app.cpp 451 462 525
/src/algo/blast/format/blast_format.cpp 1434 1616
/src/algo/blast/format/blastxml2_format.cpp 758 762 885 889
/src/algo/blast/format/blastxml_format.cpp 758 762
/src/algo/blast/vdb/vdb2blast_util.cpp 555 572
/src/algo/gnomon/gnomon_model.cpp 1597
/src/algo/gnomon/hmm.cpp 115 310 344 402 409 575 588 610 698 730 772 777 784
/src/algo/gnomon/hmm.hpp 100
/src/algo/gnomon/hmm_inlines.hpp 53 60 101 161
/src/algo/ms/omssa/Mod.cpp 63
/src/algo/ms/omssa/msms.cpp 677
/src/algo/ms/omssa/mspeak.cpp 328 552
/src/algo/ms/omssa/mspeak.hpp 1157 1246 1252
/src/algo/ms/omssa/omssa.cpp 356 573 587 1545
/src/algo/sequence/align_cleanup.cpp 77 195 283 313 534
/src/algo/sequence/demo/xcompareannotsdemo.cpp 634 653 672
/src/algo/sequence/project_exons.cpp 1808 1837
/src/algo/structure/struct_dp/block_align.cpp 49
/src/algo/structure/struct_dp/demo/struct_dp_demo.cpp 51
/src/algo/structure/struct_util/demo/struct_util_demo.cpp 57
/src/algo/structure/struct_util/struct_util.cpp 653
/src/algo/structure/struct_util/su_private.hpp 43
/src/algo/winmask/seq_masker_ostat_opt.cpp 116
/src/algo/winmask/win_mask_util.cpp 53 108
/src/app/agp_validate/AgpFastaComparator.cpp 167 168 169 339 395 528 546 568 621 645 649 654 662 670 680 764 800 834 844 850 856 858 870 883 902 904 920 923 934 939 950 955 971
/src/app/asn2asn/asn2asn.cpp 234 439 479
/src/app/asn2fasta/asn2fasta.cpp 514 549 552
/src/app/asn2flat/asn2flat.cpp 511 514 828 910 928 943 957
/src/app/asn_cache/asn_cache_test.cpp 213 290 301 401 406 409 410 412 419 429 435
/src/app/asn_cache/cache_index_copy.cpp 139 144
/src/app/asn_cache/concat_seqentries.cpp 109 112 153
/src/app/asn_cache/dump_seqids.cpp 106 109
/src/app/asn_cache/prime_cache.cpp 663 667 742 748 851 855 935 942 1034
/src/app/asn_cache/read_index_speed.cpp 108 111
/src/app/asn_cache/sub_cache_create.cpp 569 915 949 953 981 997 1075 1092 1095 1096 1097 1100 1102 1103 1104 1172 1190 1246 1251 1263 1345 1401 1412 1419 1452 1462 1517 1539 1548 1630 1641
/src/app/asn_cache/walk_cache_test.cpp 136 148
/src/app/asn_cleanup/asn_cleanup.cpp 979 990 1005 1019 1144 1146 1148
/src/app/asnval/asnval.cpp 562
/src/app/asnval/thread_state.cpp 584
/src/app/blast/blast_app_util.hpp 169 173 174 178 182 189 194 198 203 207 211 217 221 224 230 233 236 242 247 251 255 259 263
/src/app/blastdb/blastdb_path.cpp 125 128
/src/app/blastdb/blastdbcmd.cpp 206 264 309 421 427 458 464 505 513 891 894
/src/app/blastdb/blastdbcp.cpp 619 624
/src/app/blastdb/makeblastdb.cpp 898 1029
/src/app/blastdb/makeprofiledb.cpp 1909 1913 1917 1921 1925
/src/app/blastvdb/blast_vdb_cmd.cpp 380 383 745 750
/src/app/cn3d/cn3d_tools.hpp 86 209 224
/src/app/cn3d/file_messaging.cpp 56
/src/app/cn3d/vector_math.hpp 80 88 194 202
/src/app/convert_seq/gff_reader.cpp 372 374
/src/app/gi2taxid/gi2taxid.cpp 135
/src/app/grid/grid_cli/ns_cmds.cpp 770 790 805 815 819
/src/app/grid/test/test_netschedule_node.cpp 181 215
/src/app/netcache/distribution_conf.cpp 801
/src/app/netcache/logging.cpp 783 784 806 974
/src/app/netcache/message_handler.cpp 1911 2615 2618 3093 3099 3256 3342 3352
/src/app/netcache/nc_storage.cpp 562 569 576 798 829
/src/app/netcache/nc_storage_blob.cpp 1023 1880
/src/app/netcache/netcached.cpp 412 549
/src/app/netcache/peer_control.cpp 345 979
/src/app/netcache/server_core.cpp 120
/src/app/netcache/sockets_man.cpp 331 597
/src/app/netcache/srv_diag.hpp 83
/src/app/netcache/srv_lib.hpp 362
/src/app/netcache/test/test_nc_stress.cpp 138 146 157 167 182 191 222 244 282 319
/src/app/netcache/time_man.cpp 166
/src/app/netstorage/nst_db.sql 295 299 299 301 352 356 356 358 389 394 394 396 416 416 418 463 467 467 469 490 490 492 509 509 511 521 521 523 563 568 568 570 590 590 592 626 629 629 631 651 651 653 687 736 781 820 832 864 871 884 929 936 948 948 950 957 1002 1016 1046 1083 1097 1108 1118 1151 1160 1172 1184 1199 1199 1201
/src/app/netstorage/nst_db_1_to_2.sql 62 87 94 94 96 130 136 136 138 163
/src/app/netstorage/nst_db_2.3_to_2.4.sql 73 93 144 152 152 154 164 164 166 205 210 210 212 275 298 298 300 311 311 313 350 373 373 375 437 442 442 444 454 454 456 494 499 499 501 559 562 562 564 574 574 576 609 612 612 614 655 657 657 658 666 668 668 669
/src/app/netstorage/nst_db_2.4_to_2.5.sql 67 87 120 123 123 126 159 162 162 164 203 209 209 210 262 268 268 269 282 321 323 323 324
/src/app/netstorage/nst_db_2.5_to_2.6.sql 65 85 134 136 136 137
/src/app/netstorage/nst_db_2.6_to_2.7.sql 81 101 132 144 144 147 180 211 226 226 229 262 262 263 275 275 276 291 291 293 325 334 334 335 355 355 356 368 368 369 402 408 408 411 449 458 458 461 501 507 507 510 550 564 564 565 622 632 632 633 668 668 670 687 687 688 696 696 697 739 749 749 750 787 787 789 824 830 830 832 865 932 938 938 946 946 949 962 962 969 969 972 1010 1017 1017 1025 1025 1028 1096 1105 1105 1107 1117 1117 1119 1175 1184 1184 1186 1250 1261 1261 1263 1273 1273 1275 1342 1354 1354 1356 1366 1366 1368 1424 1433 1433 1435 1489 1491 1491 1492
/src/app/netstorage/nst_db_2.7_to_3.8.sql 68 88 198 208 208 209 244 244 246 263 263 264 272 272 273 314 325 325 327 337 337 339 388 397 397 398 418 418 419 431 431 432 466 472 472 475 517 532 532 535 568 568 569 581 581 582 597 597 599 631 643 643 646 679 718 732 743 753 786 816 825 825 828 881 924 930 930 933 977 1037 1047 1047 1048 1085 1085 1087 1143 1152 1152 1154 1164 1164 1166 1223 1232 1232 1234 1312 1318 1318 1326 1326 1329 1342 1342 1349 1349 1352 1391 1398 1398 1406 1406 1409 1478 1490 1490 1492 1502 1502 1504 1562 1571 1571 1573 1633 1647 1647 1648 1716 1739 1739 1741 1752 1752 1754 1792 1815 1815 1817 1856 1858 1858 1859 1866 1868 1868 1869
/src/app/netstorage/nst_db_2_to_2.3.sql 63 115 122 122 124 134 134 136 167 169 169 170
/src/app/netstorage/nst_db_3.8_to_4.9.sql 70 90 176 221 274 277 277 278 325 339 350 360 385 387 387 388 395 397 397 398
/src/app/netstorage/nst_db_4.9_to_5.10.sql 67 87 164 272 286 297 307 354 419 422 422 423 481 490 490 492 502 502 504 559 570 570 572 582 582 584 652 665 665 667 677 677 679 738 748 748 750 810 812 812 813 820 822 822 823
/src/app/netstorage/nst_db_5.10_to_5.11.sql 68 88 118 125 125 128 197 266 279 279 280 317 317 319 358 368 368 371 407 409 409 410
/src/app/netstorage/nst_db_5.11_to_6.12.sql 82 102 180 189 189 191 222 222 224 275 282 282 290 290 293 310 310 312 363 373 373 375 406 406 408 457 480 480 482 505 505 507 558 568 568 569 600 600 602 619 619 620 628 628 629 671 685 685 686 717 717 719 752 754 754 755 762 764 764 765
/src/app/netstorage/nst_db_6.12_to_6.13.sql 69 89 119 161 175 186 196 222 224 224 225
/src/app/netstorage/nst_db_6.13_to_6.14.sql 69 89 125 136 136 138 153 153 155 196 198 198 199
/src/app/netstorage/nst_db_6.14_to_6.15.sql 70 90 125 132 132 140 140 143 161 161 163 189 191 191 192
/src/app/objextract/objextract.cpp 248
/src/app/objmgr/demo/objmgr_demo.cpp 1349 1472
/src/app/pubseq_gateway/client/psg_client_cgi.cpp 251 261 300
/src/app/pubseq_gateway/server/http_reply.hpp 235 237 294
/src/app/read_blast_result/shortcuts.cpp 120 124 128
/src/app/streamtest/presenter.hpp 138
/src/app/streamtest/process_agpwrite.hpp 120
/src/app/streamtest/process_cleanup.hpp 76
/src/app/streamtest/process_defline.hpp 313 371
/src/app/streamtest/process_eutils.hpp 119
/src/app/streamtest/process_explore.hpp 160
/src/app/streamtest/process_fasta.hpp 119
/src/app/streamtest/process_flatfile.hpp 132
/src/app/streamtest/process_gene_overlap.hpp 126 253
/src/app/streamtest/process_invert.hpp 129
/src/app/streamtest/process_null.hpp 97
/src/app/streamtest/process_prosplign.hpp 112
/src/app/streamtest/process_seqvector.hpp 209
/src/app/streamtest/process_title.hpp 162
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/src/objtools/pubseq_gateway/cassandra/cass_driver.cpp 91
/src/objtools/pubseq_gateway/cassandra/cass_query_list.cpp 80 83 86 530
/src/objtools/pubseq_gateway/cassandra/fullscan/worker.cpp 190
/src/objtools/pubseq_gateway/cassandra/nannot_task/fetch.cpp 277
/src/objtools/pubseq_gateway/cassandra/si2csi_task/fetch.cpp 164
/src/objtools/pubseq_gateway/cassandra/status_history/fetch.cpp 134
/src/objtools/pubseq_gateway/cassandra/status_history/get_public_comment.cpp 227 232 248
/src/objtools/pubseq_gateway/ipg/fetch_ipg_report.cpp 394
/src/objtools/readers/aln_error_reporter.cpp 76 79 88
/src/objtools/readers/aln_reader.cpp 359 424
/src/objtools/readers/aln_scanner_nexus.cpp 261
/src/objtools/readers/glimmer_reader.cpp 108 120 143 164 193 213
/src/objtools/readers/seqid_validate.cpp 82
/src/objtools/test/objmgr/test_annot_ci.cpp 306 317 332
/src/objtools/uudutil/project_storage.cpp 371
/src/objtools/validator/tax_validation_and_cleanup.cpp 1790 1809 1882 1921
/src/objtools/validator/validerror_bioseq.cpp 8355
/src/objtools/variation/test/shift/test-shift.cpp 181 192 237 247 253 302 308 325 335 341 365 371 377
/src/objtools/variation/variation_utils.cpp 141 908 1073 1201 1202 1296 1534
/src/objtools/writers/vcf_writer.cpp 137 446
/src/sample/app/eutils/eutils_sample.cpp 315 426 588 688 722 744 771
/src/sample/app/soap/client/soap_client_sample.cpp 192 201 222 225 228
/src/serial/datatool/generate.cpp 1256
/src/serial/member.cpp 1069
/src/sra/readers/bam/bamread.cpp 533 534 535 579
/src/sra/readers/sra/vdbread.cpp 754 755 756 800
/src/util/compress/api/tar.cpp 1445 1492 1719 1810 1983 1997 2550 2892 2908 2963 2991 3020 3034 3046 3124 3482 3636 3649 3702 3729 3759 3776 3913 3931 3987 4062 4354 4395 4575
/src/util/image/demo/conv_image.cpp 102
/src/util/image/demo/image_info.cpp 114
/src/util/image/demo/sub_image.cpp 108
/src/util/image/image_io.cpp 194 222 254 274 296 318 342
/src/util/image/image_io_gif.cpp 111 112 217 224 225 258 259 282 290 291 409 410 448 466 467 468 473 533 534
/src/util/image/image_io_jpeg.cpp 100 113 252 421 432 440 453 699 796
/src/util/image/image_io_png.cpp 165
/src/util/smalldns.cpp 65
/src/util/test/test_line_reader.cpp 257 262 269

2501 references in 550 files.


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