2QO7,2HEL,2R2P,2REI,3KUL


Conserved Protein Domain Family
PTKc_EphR_A

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cd05066: PTKc_EphR_A 
Click on image for an interactive view with Cn3D
Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. This subfamily is composed of most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10. Class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphA receptors and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. EphRs comprise the largest subfamily of receptor PTKs (RTKs). EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270651
Aligned: 16 rows
Threshold Bit Score: 568.343
Created: 17-May-2007
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 22 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Comment:includes ATP binding and substrate binding sites
  • Comment:Based on the structures of other PTK family members bound to substrate peptides and ATP analogs, and the structures of Eph receptors bound with ATP analogs.
  • Citation:PMID 9312016

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

Feature 1                    # ###   #                 # #                                        
2QO7_A         42 LDATNISIDKVVGAGEFGEVCSGRLKL.[3].KEISVAIKTLKVGYTE.[1].QRRDFLGEASIMGQFDHPNIIRLEGVV 115  human
EAW48518      623 LDASCIKIERVIGAGEFGEVCSGRLKL.[3].RDVAVAIKTLKVGYTE.[1].QRRDFLCEASIMGQFDHPNVVHLEGVV 696  human
EAW79887      729 IDPSRIRIERVIGAGEFGEVCSGRLKT.[3].REIPVAIKTLKGGHMD.[1].QRRDFLREASIMGQFDHPNIIRLEGVV 802  human
NP_990414     623 LDASCIKIERVIGAGEFGEVCSGRLKL.[3].RDVAVAIKTLKVGYTE.[1].QRRDFLCEASIMGQFDHPNVVHLEGVV 696  chicken
NP_001038444  646 LDASCIKIERVIGAGEFGEVCSGRLKL.[3].RDVSVAIKTLKVGYTE.[1].QRRDFLCEASIMGQFDHPNVVHLEGVV 719  zebrafish
NP_990761     616 LDASNISIDKVVGAGEFGEVCSGRLKL.[3].KEISVAIKTLKAGYTE.[1].QRRDFLGEASIMGQFDHPNIIRLEGVV 689  chicken
CAG09222      596 LDASCIAIDKVVGAGEFGEVCSGRLKL.[3].KEICVAIKTLKGGYTD.[1].QRRDFLAEASIMGQFDHPNIIRLEGVV 669  Tetraodon nigrovir...
AAB60613      624 IEASCITIERVIGAGEFGEVCSGRLKL.[3].REFPVAIKTLKVGYTE.[1].QRRDFLGEASIMGQFDHPNIIHLEGVV 697  chicken
2R2P_A         19 IEASCITIERVIGAGEFGEVCSGRLKL.[3].RELPVAIKTLKVGYTE.[1].QRRDFLGEASIMGQFDHPNIIHLEGVV 92   human
2REI_A         40 LDASCIKIERVIGAGEFGEVCSGRLKL.[3].RDVAVAIKTLKVGYTE.[1].QRRDFLCEASIMGQFDHPNVVHLEGVV 113  human

Feature 1                     ## #                                             #   ## #           
2QO7_A        116 T.[2].KPVMIVTEXMENGSLDSFLRKH.[3].FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS.[1].LVC 186  human
EAW48518      697 T.[2].KPVMIVIEFMENGALDAFLRKH.[3].FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS.[1].LVC 767  human
EAW79887      803 T.[2].RPVMIVVEYMENGSLDSFLRKH.[3].FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS.[1].LVC 873  human
NP_990414     697 T.[2].KPVMIVIEYMENGALDAFLRKH.[3].FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS.[1].LVC 767  chicken
NP_001038444  720 T.[2].KPVMIVIEYMENGSLDAFLRKH.[3].FTVIQLVGMLRGIAAGMRYLSDMGYVHRDLAARNILVNS.[1].LVC 790  zebrafish
NP_990761     690 T.[2].KPVMIVTEYMENGSLDSFLRKH.[3].FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS.[1].LVC 760  chicken
CAG09222      670 T.[2].KPVMIVTEYMENGSLDTFLRKH.[3].FTGIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS.[1].LVC 740  Tetraodon nigrovir...
AAB60613      698 T.[2].KPVMIVTEYMENGSLDTFLKKN.[3].FTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS.[1].LVC 768  chicken
2R2P_A         93 T.[2].KPVMIVTEYMENGSLDTFLKKN.[3].FTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS.[1].LVC 163  human
2REI_A        114 T.[2].KPVMIVIEFMENGALDAFLRKH.[3].FTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS.[1].LVC 184  human

Feature 1            #                  #####        #                                     #      
2QO7_A        187 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY.[1].KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA 262  human
EAW48518      768 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY.[1].KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 843  human
EAW79887      874 KVSDFGLSRVLEDDPEAAYTTTGGKIPIRWTAPEAIAY.[1].KFSSASDAWSYGIVMWEVMSYGERPYWEMSNQDVILS 949  human
NP_990414     768 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY.[1].KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 843  chicken
NP_001038444  791 KVSDFGLSRVIDDDPEAVYTTTGGKIPVRWTAMEAIQY.[1].KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 866  zebrafish
NP_990761     761 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY.[1].KFTSASDAWSYGIVLWEVMSYGERPYWEMSFQDVIKA 836  chicken
CAG09222      741 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY.[1].KFTSASDAWSYGIVLWEVMSYGERPYWEMSNQDVIKA 816  Tetraodon nigrovir...
AAB60613      769 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF.[1].KFTSASDVWSYGIVMWEVMSYGERPYWEMTNQDVIKA 844  chicken
2R2P_A        164 KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF.[1].KFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKA 239  human
2REI_A        185 KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY.[1].KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA 260  human

Feature 1                                                           
2QO7_A        263 VDEGYRLPPPMDCPAALYQLMLDCWQK.[1].RNNRPKFEQIVSILDKLI 308  human
EAW48518      844 IEEGYRLPAPMDCPAGLHQLMLDCWQK.[1].RAERPKFEQIVGILDKMI 889  human
EAW79887      950 IEEGYRLPAPMGCPASLHQLMLHCWQK.[1].RNHRPKFTDIVSFLDKLI 995  human
NP_990414     844 IEEGYRLPAPMDCPAGLHQLMLDCWQK.[1].RGERPKFEQIVGILDKMI 889  chicken
NP_001038444  867 IEEGYRLPAPMDCPPGLHQLMLDCWQK.[1].RADRPKFDQIVGILDKMI 912  zebrafish
NP_990761     837 VDEGYRLPPPMDCPAALYQLMLDCWQK.[1].RNNRPKFEQIVSILDKLI 882  chicken
CAG09222      817 VDEGYRLPPPMDCPATLYQLMLDCWQK.[1].RNNRPKFEQIVSILDKLI 862  Tetraodon nigroviridis
AAB60613      845 VEEGYRLPSPMDCPAALYQLMLDCWQK.[1].RNSRPKFDEIVSMLDKLI 890  chicken
2R2P_A        240 VEEGYRLPSPMDCPAALYQLMLDCWQK.[1].RNSRPKFDEIVNMLDKLI 285  human
2REI_A        261 IEEGYRLPAPMDCPAGLHQLMLDCWQK.[1].RAERPKFEQIVGILDKMI 306  human

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