2VGQ


Conserved Protein Domain Family
CARD_IPS1

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cd08811: CARD_IPS1 
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Caspase activation and recruitment domain (CARD) found in IPS-1
Caspase activation and recruitment domain (CARD) found in IPS-1 (Interferon beta promoter stimulator protein 1), also known as CARDIF, VISA or MAVS. IPS-1 is an adaptor protein that plays an important role in interferon induction in response to viral infection. It is crucial in triggering innate immunity and in developing adaptive immunity against viral pathogens. The CARD of IPS-1 associates with the CARDs of two RNA helicases, RIG-I and MDA5, which bind viral DNA in the cytoplasm during the initial stage of intracellular antiviral response, leading to the induction of type I interferons. In general, CARDs are death domains (DDs) found associated with caspases. They are known to be important in the signaling pathways for apoptosis, inflammation, and host-defense mechanisms. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including PYRIN and DED (Death Effector Domain). They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Statistics
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PSSM-Id: 260073
Aligned: 9 rows
Threshold Bit Score: 135.177
Created: 17-May-2010
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

2VGQ_A       387 FAEDKTYKYICRNFSNFCN     VDVVEILPYLPCLTARDQDRLRATCTLSGNRDTLWHLFNTLQ     RRPGWVEYF 456 
Q8VCF0         3 FAEDKTYKYIRDNHSKFCC     VDVLEILPYLSCLTASDQDRLRASYRQIGNRDTLWGLFNNLQ     RRPGWVEVF 72   house mouse
NP_001012911   3 FAEDKVYNHILRNMSRFCD     IHVASLVDSLSCLTDADRDELHTRQDMRGIRATAYKFYQHLK     CRKGWVMDL 72   chicken
CAX48608       4 TREQFYNKGIRPYMGRFAT.[1].IKVREILPYLQCLTISDREEIEAKKEQYGNYNAVQTLLDNLR     RRENWIDEF 74   zebrafish
NP_001161824   4 FSREKLSLHLRRRMGVFVT.[1].VKATELIIYLPCLTPSDKEEILAKKDFSGNYAAMQLLLDYVQ     KRMNWPEEL 74   Atlantic salmon
Q7Z434         3 FAEDKTYKYICRNFSNFCN     VDVVEILPYLPCLTARDQDRLRATCTLSGNRDTLWHLFNTLQ     RRPGWVEYF 72   human
ADL16494       4 ASDQLYKGYLRRNMPTIVS.[1].VKVTQIIPYLPCLTDHDRENIEAKREMYGNFDSMVLLLDCLK     RRENWPEEF 74   spotted green puffe...
XP_002737903  18 YVDPIEITILRQQRGVLIH.[1].IIPSQIIPHLTCLTRTDEGRILTAENKGSTIDGALTLLDLLV.[1].KRTEWYEDF 89   Saccoglossus kowale...
XP_002737901  21 YEDPIEIKVLRKQRGDFMH.[1].IIPSQIVPHLTCLTRADESCILAATSRKGDIEGAGVLLYHLM.[1].KKDVWYEDL 92   Saccoglossus kowale...

2VGQ_A       457 IAALRGCE.[2].DLADEVASVYQ 477 
Q8VCF0        73 IRALQICE.[2].GLADQVTRVYQ 93   house mouse
NP_001012911  73 INALHQNN.[2].HLAEELQRVYD 93   chicken
CAX48608      75 ITALRKCE.[2].SLANEMSDIYD 95   zebrafish
NP_001161824  75 MSALEMLE.[2].DLADELKAEWN 95   Atlantic salmon
Q7Z434        73 IAALRGCE.[2].DLADEVASVYQ 93   human
ADL16494      75 ISALEDCN.[2].TIAADIRREYD 95   spotted green pufferfish
XP_002737903  90 LKALRNDE.[4].HLAASLEEGVE 112  Saccoglossus kowalevskii
XP_002737901  93 LKALRNND.[4].HLATSLENEVK 115  Saccoglossus kowalevskii
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