Conserved Protein Domain Family
CoV_NSP15_M

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pfam19216: CoV_NSP15_M 
Coronavirus replicase NSP15, middle domain
This entry represents the non-catalytic middle domain from coronavirus non-structural protein 15 (NSP15). NSP15 is encoded by ORF1a/1ab and proteolytically released from the pp1a/1ab polyprotein. This domain is formed by ten beta strands organized into three beta hairpins.
Statistics
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PSSM-Id: 466000
Aligned: 19 rows
Threshold Bit Score: 137.848
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:

AIL94214     6657 NVNPVPEVKLLRNIGVDICNGFTLW.[1].YEQQAPV.[1].N.[1].TIGVCKYTDI.[8].CKPLTIL.[1].DARLS 6723
YP_001876435 6064 NIDVIPKSAILYGLGVDVTAGFTLW.[1].RELSQPV.[1].N.[1].VVDTSKVIDI.[2].NEKLCVL.[1].DDRVK 6124
AFD29233     5664 NISSIPTASLLTGLGVNTTVNFTVW     LNGDTLF     S.[1].TVNVSTYTDV.[1].NNDVCLL     DERYK 5720
YP_005352862 5733 HTDTIPSISLLASLGITCTRNFTVW     RENDTVF.[1].N     TINVSAYTDV.[1].PDKYTVL.[1].DERYG 5790
AML40880     5723 HTRSLPTTQLLSGLGVTATRNFTVW     FDNDTIF     Q.[1].TINVSTYTDI.[1].PSTHVVL.[1].DDRYG 5780
P0C6W3       6537 AVRSHPDLNLLRNLEVDVCYNFVLW.[1].YDRNNIY.[1].T.[1].TIGVCKYTDI.[2].NPNLNMC.[1].DIRDK 6597 Tylonycteris bat c...
AGT28262     6558 AVRSHPDFKLLKNLQADVCYKHVLW.[1].YERSNIY.[1].T.[1].TIGVCKYTDI.[2].NAALNIC.[1].DIRDQ 6618
AOG30821     6400 SVKVVPECKLLRHLGVTCTYKQVLW.[1].YENEAPI.[1].P.[1].TIGVCNYTDL.[7].VQAQTVL.[1].DGRDQ 6465
P0C6W5       6358 SVNVVPEVKLLRNLGVTCTYNLVIW.[1].YESNAPL.[1].P.[1].TVGICTYTDL.[2].LDDQVVL.[1].DGRQL 6418 Rousettus bat coro...
AGT21332     6248 KVGLTPPLTILRNLGVVRTYKFVLW.[1].YEAERPF.[1].S.[1].TKDVCKYTDF     DAGVCTC.[1].DNSVQ 6306

AIL94214     6724 GHIDQFCNADNAVLYSDYP.[1].KRLQGSKG.[1].EHCS.[1].NGVIVNSTP.[11].FYFYKRENGQ 6787
YP_001876435 6125 GSRQRFLQTKNAVLISTIR.[5].IELESVRI.[1].ASSC.[2].DSTPVSTVR.[ 5].MFVYVRKDGK 6187
AFD29233     5721 STLSDFLKLDNAVFISPTQ.[1].KKYGATPI.[1].QLQQ     CGNPVYGDL      IYLYVRRDGK 5772
YP_005352862 5791 TSYSEFCQYDNAVFLSPFL.[1].KKAKPIVI     TFLT.[1].NGVRVYDCT      LYIYWRYNGE 5842
AML40880     5781 TDWSQFNQLPNAVFLTKTK.[1].KKTEPFVC.[1].ALTL     NGVAIDGEE      LYIYVRYNNQ 5832
P0C6W3       6598 GSLERFMSMPNGVLISDRK.[1].KNYPCISG.[1].KHAY.[1].NGAILRNID.[ 6].FYLYKKVNNE 6656 Tylonycteris bat coronaviru...
AGT28262     6619 GSLEKFLTLPNGILISDRK.[1].KNYPCVVG.[1].DYAY.[1].NGATIRDSE.[ 7].FYIYKKLNGE 6678
AOG30821     6466 DAYSKFCQLNNAVYFSPQK     PKCVAIQG.[1].PHAS.[1].NGVVIEAPE.[ 4].FWYAVRRNGE 6521
P0C6W5       6419 DAYSKFCQLKNAIYFSPSK     PKCVCTRG.[1].THAS.[1].NGVVVEAPD.[ 4].FWYAMRKDGA 6474 Rousettus bat coronavirus HKU9
AGT21332     6307 GSFERFTLDPDAVLISLTA.[1].KKLTPIKI     SYGY.[1].NGVAVSQHE.[ 5].WYIYTRKGGK 6363
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