1EC6,1EC6,1J4W,1J4W,1K1G,1VIG,1WE8,1ZZI,2ANR,2ANR,2AXY,2CPQ,2CTE,2CTF,2CTJ,2CTK,2CTL,2CTM,2E3U,2E3U,2JZX,2N8L,2N8M,2P2R,2QND,2YQR,3N89,3N89,3N89,3N89,3V69,4AM3,4JVH,4LIJ,4OVA,4QMF,4QMF,4WAL,5ELT,5WWW,5WWX,5ZF6,6D6Q,6G18,6G18,6GQE,6GQE,6GY4,6Q3V,6Q3V,6Y2D,1TUA


Conserved Protein Domain Family
KH-I

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cd00105: KH-I 
K homology (KH) RNA-binding domain, type I
KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that belong to different protein folds, but they share a single KH motif. The KH motif is folded into a beta alpha alpha beta unit. In addition to the core, type II KH domains (e.g. ribosomal protein S3) include an N-terminal extension and type I KH domains (e.g. hnRNP K) contain a C-terminal extension. Some KH-I superfamily members contain a divergent KH domain that lacks the RNA-binding GXXG motif. Some others have a mutated GXXG motif which may or may not have nucleic acid binding ability.
Statistics
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PSSM-Id: 411802
Aligned: 751 rows
Threshold Bit Score: 28.4185
Created: 1-Nov-2000
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EC6_A         5 VEIAVPenlvgailgkgg-ktlveyqeltgARIQISkkgeflpgtrnRRVTITGs--pAATQAAQYLIS 70   human
AAX80558      23 EVIEAPpefighvigegg-stikslqcetgATITISd---------gCRVCITAdn-kEKLSDATSRVR 80   Trypanosoma brucei
Q9S7G6       612 ATLKYSndslrtligpmg-vlkrkievetgARLSIDn----------GTLTIVAkn-qDVMEKAQEQVD 668  thale cress
AAX26307     132 VRISVPvecrgyligrkg-erlqelesstmTRISIPphna----ldpDVVIVTGp--kRGILEAEELIY 193  Schistosoma japonicum
EEH53560     631 ATLEMDqkfvgkligpqg-stiknieattsAKISIRqaepa-agelaARVGIFAps-kDALALAVEQVE 696  Micromonas pusilla CCMP1545
OLQ09491     171 FVTVVPagavehiigpgg-dtieklvestsSEINISrhaia--gtelQPVSIAGt--pKNMLIACMRVL 234  Symbiodinium microadriaticum
ONK73837      34 IVTCVPgkkigriigrgg-envrklmasseARIVIGksmp---gseeQLVTIFSss-nELDAFGDRLVC 97   garden asparagus
XP_022838545  49 ETLVISqddarfligaqg-ktkkklmkvsgASIEISaiegd--aegkQRLEIAAed-eAKLKFARECCE 113  Ostreococcus tauri
PSC69332      94 FKFLVPssvvgavlgrgg-ntvasikretgAYVQFTrpgta-tnsprERMMIVAverrEQLAKAVSMVL 160  Micractinium conductrix
XP_005823861 735 VRFSVPlvaigkiigpggttirslieefklTNIDIVetk------seGVVTITAls-sDNIAKAEDKVR 796  Guillardia theta CCMP2712
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