2W96,1G3N,1BI8,1XO2,3G33


Conserved Protein Domain Family
STKc_CDK4_6_like

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cd07838: STKc_CDK4_6_like 
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Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases
STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinases activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.
Statistics
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PSSM-Id: 270831
Aligned: 18 rows
Threshold Bit Score: 479.464
Created: 18-Jul-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 19 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ######  #             # #                                   #             
2W96_B         6 YEPVAEIGVGAYGTVYKARDPh-sGHFVALKSVRVPNG--EEGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTd- 81  human
1XO2_B        13 YECVAEIGEGAYGKVFKARDLkngGRFVALKRVRVQTG--EEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTd- 89  human
1523997       26 YQELNIIGEGAYGTVYRARDVi-tGNIVALKKVRISLN--ENGVPMSTLREISLLKQLNASNHANIVKLYEVCQFLERd- 101 fruit fly
AAK95392      14 YVQAAEIGSGAYGIVYKARDTe-tGHFVALKSVRIPIG--EEGMPVSTIREISLLRHLCQLDHPNIVKLLDVCDVMDVgr 90  purple urchin
CAG07253       1 YELLAEVGEGTYGKVYKAREEggeQRLLAVKKLHFRGDasEAGIPAAMVREVALMRKMKYFNHPNVVKLLDVSVVPAG-- 78  Tetraodon nigro...
XP_698003     11 YEILAEIGQGAYGKVYKAREKreqQRLIAVKRLNIPEEp-ESGIPQFMIREVALLRKIEHFNHPNIVKLMSVSAGWQN-- 87  zebrafish
XP_002109748   4 YVQVTEIANGAYGRVYKARDLn-hNRLVALKKIAVIND--EQGIPISTIREITSLKSLQSFGHQNIVRLYDIFANYTVdr 80  Trichoplax adha...
XP_002423526  20 YEDLALIGNGAYGTVYKAKNKt-nGHIVAMKKIRVHLCe-DGGLPPSTLREIAMLKQVDQYEHPNIVRLLDVCYGPRLe- 96  human body louse
ACO15221      85 YEEINRIGKGAYGTVYLARDTq-kDRFVALKKMKFCLT--EDGVPMAILREISLLKQLERFDHPNIVRLLDITHGQRYe- 160 Caligus clemensi
XP_975093      8 YDEMDSIGRGAYGIVYKGKHKt-tGKIVALKKISVPLN--DDGVPMNTLREIGVLKQLNSHEHPNIVQLLDVCHGIQTe- 83  red flour beetle
Feature 1                ####  #                                             ## #           #    
2W96_B        82 REIKVTLVFEHVDQDLRTYLDKAPpp-gLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSg-GTVKLADFGLA 159 human
1XO2_B        90 RETKLTLVFEHVDQDLTTYLDKVPep-gVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSs-GQIKLADFGLA 167 human
1523997      102 GQLLILLAFEHVEQDLSDLIDRLPks-gMSPPTIQRLSRELLTGVDFLHSHRIIHRDLKPQNLLVSSq-GHLKIADFGLA 179 fruit fly
AAK95392      91 SEMMLTLVFELVDQDLAQYLEKCPpp-gLSSCTIKFLMHQLLSGVEYLHSHRVTHRDLKPQNILVASd-KKLKLTDFGLS 168 purple urchin
CAG07253      79 RSLDLSLVLEYVDQDLSTYLSKVPas-gLSKDAIKDVMHQLLSGLDFLHTNLVVHRDLKPENILVSSr-REVKIADFGLA 156 Tetraodon nigro...
XP_698003     88 HKFDMTLVFEYIDQDLTTFLSRASek-gLAKDKIKDVMRQLLSGLDFLHTNSVIHRDLKPDNVLVSSr-GEVKIADFGLA 165 zebrafish
XP_002109748  81 RTMDLTLVFEHVEQDLQTYIRNCPsa-gIDTRKIKDIIYQIVNAIDFLHANRIVHRDLKPQNVLISRq-GIVKVADFGLA 158 Trichoplax adha...
XP_002423526  97 EYLVLFIVFEHMEQDLSQFISNCPap-gIGVNRIKDLTFQLLSGVDFLHTHRIIHRDLKPQNILVSCdgQYLKLADFGLA 175 human body louse
ACO15221     161 REMSLHLIFEHAHQDLATYLEKCPsp-gLPPAKIKNLIWQIFNGVDFLHSHRIVHRDLKPQNLLITRs-GRVKLTDFGLA 238 Caligus clemensi
XP_975093     84 RELLMYLVFEHVDQDLALYMEKYAkrggFSSVQIRNMSQEILRGVDFLHSNRIVHRDLKPQNLLVTNe-GHIKIADFGLA 162 red flour beetle
Feature 1                                                                                        
2W96_B       160 RIYSYQMA-----------------------LDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRr-KPLFCGNs 215 human
1XO2_B       168 RIYSFQMA-----------------------LTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRr-KPLFRGSs 223 human
1523997      180 KTYGSEMK-----------------------LTSVVVTLWYRAPEVLLAQPYNSTVDIWSAACIIFEMFNr-RALFPGTs 235 fruit fly
AAK95392     169 RVYSFQMA-----------------------LTPVVVTMWYRAPEVLLQASYATPVDMWSVGCIFAELYRr-RPLFRGQs 224 purple urchin
CAG07253     157 RIYSFNMAltpgvseasgrvrpaprrssdysRCLQVVTLWYRAPEVLLNSVYMFSVDMWSVGCIFAELFLl-RPLFQGYt 235 Tetraodon nigro...
XP_698003    166 RIYTYRIA-----------------------LTPCVVTLWYRAPEVLLQSSYMSSVDMWSAGCIFAELFLl-RPLFRGFt 221 zebrafish
XP_002109748 159 KVFCENVP-----------------------ITSVVVTLWYRCPEVLLQSTYATPVDMWSVGCIMAELYLr-EPLFCGQt 214 Trichoplax adha...
XP_002423526 176 KVYEFESS-----------------------LTSVVATLWYRPPEVLLRDTYATPLDVWSCGCIMAELYRr-TPLFPGVt 231 human body louse
ACO15221     239 RIYDFYSL-----------------------LTSVVVTLWYRSPEVLMGLSYATPVDVWACGCIFAELFIlrKALFPGEy 295 Caligus clemensi
XP_975093    163 KTYDFEMR-----------------------LTSVVVTLWYRAPEVLLGVPYATPVDVWSIGCIIAELFSl-KPLFYGSs 218 red flour beetle
Feature 1                                                                                        
2W96_B       216 EADQLGKIFDLIGLPPEDDWPRdvs-lprGAFPPRGPRPV--QSVVPEm---------------------eESGAQLLLE 271 human
1XO2_B       224 DVDQLGKILDVIGLPGEEDWPRdva-lprQAFHSKSAQPI--EKFVTDi---------------------dELGKDLLLK 279 human
1523997      236 EKNQLDRIFELTGRPTEQQWPQtis-valEHFPQRHPKRP--KDFCPHl---------------------cKYADDLLNK 291 fruit fly
AAK95392     225 DKDQLHKIFEVIGLPPEDQWPDval--pwSSFRQTGQRSF--LDLVQEi---------------------cNQGLDLLER 279 purple urchin
CAG07253     236 EAQQLQKIFEVIGVPTEEDWPRds----pISYPSSFRPEGscTKPLPSl---------------------gPQEHHLLSE 290 Tetraodon nigro...
XP_698003    222 EIQQLQKIFEVIGLPGKEDWPVes----pVCYSPALVEKKp-ATQVLAsl--------------------tPEENGLLSQ 276 zebrafish
XP_002109748 215 DIDQLQKIFSMTGLPDESEWPVnip-fsrSTFCQYTRRPVqySEMMPEi---------------------cQDGVDLLQK 272 Trichoplax adha...
XP_002423526 232 EGDQLGKIFDIIGTPSESEWPQnts-llrSSFPHSPGIDL--EAVVPEi---------------------cGHGKDLLQR 287 human body louse
ACO15221     296 EMDQLNRIFDVIGTPQAEEWPEnaa-vtrSNFRSRAVVDM--KDIVPEi---------------------dDEGADLLKR 351 Caligus clemensi
XP_975093    219 ESDQLSKILRILGKPPQHEWPDnslsinwDSFDNTERIDF--KEIIQNlgdsahdlltvsycyfvymffmfLFYGQMLQK 296 red flour beetle
Feature 1                             
2W96_B       272 MLTFNPHKRISAFRALQHSYL 292 human
1XO2_B       280 CLTFNPAKRISAYSALSHPYF 300 human
1523997      292 MLSYDLHLRPSALACLEHDYF 312 fruit fly
AAK95392     280 MLCFNPDHRMTAEQGLLHGFF 300 purple urchin
CAG07253     291 CLTFRPSSRISAAKALTHPFF 311 Tetraodon nigroviridis
XP_698003    277 FLAFNPVHRISACEALAHPYL 297 zebrafish
XP_002109748 273 LLKFNPKERLTAEESLQHPYF 293 Trichoplax adhaerens
XP_002423526 288 MLRFEQHKRITACEALNHPYF 308 human body louse
ACO15221     352 TLLFDPHSRITVSDALVHPYF 372 Caligus clemensi
XP_975093    297 MLTFDPKKRMSTLDALNHVYF 317 red flour beetle

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