Table 1
Data quality control and assembly quality data statistics
| Sample | Raw Date Base | Valid Date Base | Valid Ratio Reads | Q20% | Q30% | Mapped Reads | Unique Mapped reads | ||
|---|---|---|---|---|---|---|---|---|---|
| CK_1 | 5.89G | 5.75G | 97.67 | 99.95 | 95.56 | 81.27% | 79.04% | ||
| CK _2 | 7.74G | 7.56G | 97.69 | 99.95 | 95.55 | 82.49% | 80.23% | ||
| CK _3 | 6.80G | 6.65G | 97.71 | 99.93 | 94.64 | 80.53% | 78.11% | ||
| SBF_1 | 7.51G | 7.33G | 97.56 | 99.96 | 95.82 | 82.92% | 80.54% | ||
| SBF _2 | 5.85G | 5.70G | 97.41 | 99.94 | 94.70 | 79.40% | 79.40% | ||
| SBF _3 | 5.06G | 4.94G | 97.52 | 99.93 | 94.65 | 78.95% | 78.95% | ||
| MBF_1 | 7.88G | 7.70G | 97.66 | 99.95 | 95.54 | 82.03% | 79.54% | ||
| MBF _2 | 7.07G | 6.90G | 97.65 | 99.93 | 94.62 | 81.03% | 78.65% | ||
| MBF _3 | 7.09G | 6.92G | 97.68 | 99.95 | 95.02 | 81.57% | 79.16% | ||