Evolutionary Insights into the Ecology of Coronaviruses

TABLE 1.

Sampling dates for coronaviruses

Group	Virus	Host	Isolation date (yr)	Reference or GenBank accession no.
1	BtCoV/HKU2/2004	Bats	2004	45
	BtCoV/HKU6/2004	Bats	2004	45
	BtCoV/HKU7/2004	Bats	2004	45
	BtCoV/HKU8/2004	Bats	2004	45
	BtCoV/512/2005	Bats	2005	35
	BtCoV/515/2006	Bats	2006	35
	BtCoV/527/2005	Bats	2005	35
	BtCoV/773/2005	Bats	2005	35
	BtCoV/911/2005	Bats	2005	35
	BtCoV/977/2006	Bats	2006	35
	HCoV-229E	Human	1963	12
	HCoV-NL63	Human	2003	39
	PEDV	Pig	1978	27
	TGEV	Pig	1946	7
	Feline CoV	Cat	1981	25
	RDCoV/GZ43/2003	Raccoon dog	2003	This study
	CFBCoV/DM95/2003	Chinese ferret badger	2003	This study
2	Bovine CoV	Cattle	1998	32
	HCoV-OC43	Human	1967	40
	HCoV-HKU1	Human	2003	44
	Porcine hemagglutinating encephalitis virus	Pig	1972	26
	Murine hepatitis virus	Mouse	1949	23
3	IBV Mass	Chicken	1941	6
	IBV GD/KQ6/2003	Peafowl	2003	AY641576
4	BtCoV/273/2005	Bats	2005	35
	BtCoV/279/2005	Bats	2005	35
	Bat SARS-CoV/Rm1/2004	Bats	2004	22
	Bat SARS-CoV/Rf1/2004	Bats	2004	22
	Bat SARS-CoV/Rp3/2004	Bats	2004	22
	BtCoV/HKU3/2004	Bats	2004	45
	Civet SARS-CoV/SZ3/2003	Civet	2003	11
	Civet SARS-CoV/SZ16/2003	Civet	2003	11
	Civet SARS-CoV/007/2004	Civet	2004	42
	SARS-CoV/Tor2/2003	Human	2003	14
	SARS-CoV/FRA/2003	Human	2003	36
	SARS-CoV/HK-39/2003	Human	2003	47
5	BtCoV/HKU4/2004	Bats	2004	45
	BtCoV/HKU5/2004	Bats	2004	45
	BtCoV/133/2005	Bats	2005	35
	BtCoV/355/2005	Bats	2005	35
	BtCoV/434/2005	Bats	2005	35