Volume 14; 2020

Original Research

PostSV: A Post–Processing Approach for Filtering Structural Variations

Eman Alzaid, Achraf El Allali

Bioinform Biol Insights. 2020; 14: 1177932219892957. Published online 2020 Jan 20. doi: 10.1177/1177932219892957

PMCID:: PMC6974750

Abstract Article PDF–1.1M

Review

Multi-omics Data Integration, Interpretation, and Its Application

Indhupriya Subramanian, Srikant Verma, Shiva Kumar, Abhay Jere, Krishanpal Anamika

Bioinform Biol Insights. 2020; 14: 1177932219899051. Published online 2020 Jan 31. doi: 10.1177/1177932219899051

PMCID:: PMC7003173

Abstract Article PDF–828K

Original Research

Integrative Analysis of the Genes Induced by the Intestine Microbiota of Infant Born to Term and Breastfed

Badreddine Nouadi, Yousra Sbaoui, Mariame El Messal, Faiza Bennis, Fatima Chegdani

Bioinform Biol Insights. 2020; 14: 1177932220906168. Published online 2020 Apr 29. doi: 10.1177/1177932220906168

PMCID:: PMC7218278

Abstract Article PDF–2.8M

The Nature and Arrangement of Pentatricopeptide Domains and the Linker Sequences Between Them

Sailen Barik

Bioinform Biol Insights. 2020; 14: 1177932220906434. Published online 2020 Mar 4. doi: 10.1177/1177932220906434

PMCID:: PMC7059232

Abstract Article PDF–2.1M

An NMF-Based Methodology for Selecting Biomarkers in the Landscape of Genes of Heterogeneous Cancer-Associated Fibroblast Populations

Flavia Esposito, Angelina Boccarelli, Nicoletta Del Buono

Bioinform Biol Insights. 2020; 14: 1177932220906827. Published online 2020 May 8. doi: 10.1177/1177932220906827

PMCID:: PMC7218276

Abstract Article PDF–2.1M

Concise Review

Gene-Based Clustering Algorithms: Comparison Between Denclue, Fuzzy-C, and BIRCH

Martin C Nwadiugwu

Bioinform Biol Insights. 2020; 14: 1177932220909851. Published online 2020 Apr 1. doi: 10.1177/1177932220909851

PMCID:: PMC7133071

Abstract Article PDF–1.0M

Original Research

Comparative Analysis of the Biosimilar and Innovative G-CSF Modulated Pathways on Umbilical Cord Blood–Derived Mononuclear Cells

LM Avila-Portillo, F Aristizabal, S Perdomo, A Riveros, B Ospino, JP Avila, M Butti, MC Abba

Bioinform Biol Insights. 2020; 14: 1177932220913307. Published online 2020 Mar 20. doi: 10.1177/1177932220913307

PMCID:: PMC7088127

Abstract Article PDF–6.3M

Discovering Selected Antibodies From Deep-Sequenced Phage-Display Antibody Library Using ATTILA

Andréa Queiroz Maranhão, Heidi Muniz Silva, Waldeyr Mendes Cordeiro da Silva, Renato Kaylan Alves França, Thais Canassa De Leo, Marcelo Dias-Baruffi, Rafael Trindade Burtet, Marcelo Macedo Brigido

Bioinform Biol Insights. 2020; 14: 1177932220915240. Published online 2020 Apr 30. doi: 10.1177/1177932220915240

PMCID:: PMC7218273

Abstract Article PDF–1.4M

Comparative Analysis of Sample Extraction and Library Construction for Shotgun Metagenomics

Zonghui Peng, Xiaolong Zhu, Zhijiao Wang, Xianting Yan, Guangbiao Wang, Meifang Tang, Awei Jiang, Karsten Kristiansen

Bioinform Biol Insights. 2020; 14: 1177932220915459. Published online 2020 Jun 3. doi: 10.1177/1177932220915459

PMCID:: PMC7271268

Abstract Article PDF–1.7M

Identifying Herbal Adverse Events From Spontaneous Reporting Systems Using Taxonomic Name Resolution Approach

Vivekanand Sharma, Luiz Fernando Fracassi Gelin, Indra Neil Sarkar

Bioinform Biol Insights. 2020; 14: 1177932220921350. Published online 2020 Jun 15. doi: 10.1177/1177932220921350

PMCID:: PMC7297479

Abstract Article PDF–1.2M

Methods and Protocols

Total Functional Score of Enhancer Elements Identifies Lineage-Specific Enhancers That Drive Differentiation of Pancreatic Cells

Venkat S. Malladi, Anusha Nagari, Hector L Franco, W Lee Kraus

Bioinform Biol Insights. 2020; 14: 1177932220938063. Published online 2020 Jul 1. doi: 10.1177/1177932220938063

PMCID:: PMC7331761

Abstract Article PDF–1.9M

Review

First Steps in the Analysis of Prokaryotic Pan-Genomes

Sávio Souza Costa, Luís Carlos Guimarães, Artur Silva, Siomar Castro Soares, Rafael Azevedo Baraúna

Bioinform Biol Insights. 2020; 14: 1177932220938064. Published online 2020 Aug 7. doi: 10.1177/1177932220938064

PMCID:: PMC7418249

Abstract Article PDF–1.0M

Original Research

In Silico Investigation of First-Pass Effect on Selected Small Molecule Excipients and Structural Dynamics of P-glycoprotein

Toluwase Hezekiah Fatoki, Omodele Ibraheem, Oladoja A Awofisayo, Abiodun Samuel Oyedele, Olapade Samuel Akinlolu

Bioinform Biol Insights. 2020; 14: 1177932220943183. Published online 2020 Jul 27. doi: 10.1177/1177932220943183

PMCID:: PMC7385845

Abstract Article PDF–1.1M

Review

Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era

Carlos André dos Santos-Silva, Luisa Zupin, Marx Oliveira-Lima, Lívia Maria Batista Vilela, João Pacifico Bezerra-Neto, José Ribamar Ferreira-Neto, José Diogo Cavalcanti Ferreira, Roberta Lane de Oliveira-Silva, Carolline de Jesús Pires, Flavia Figueira Aburjaile, Marianne Firmino de Oliveira, Ederson Akio Kido, Sergio Crovella, Ana Maria Benko-Iseppon

Bioinform Biol Insights. 2020; 14: 1177932220952739. Published online 2020 Sep 2. doi: 10.1177/1177932220952739

PMCID:: PMC7476358

Abstract Article PDF–2.0M

Original Research

Utility of Extrapolating Human S1500+ Genes to the Whole Transcriptome: Tunicamycin Case Study

Deepak Mav, Dhiral P Phadke, Michele R Balik-Meisner, B Alex Merrick, Scott Auerbach, Marije Niemeijer, Suzanna Huppelschoten, Audrey Baze, Celine Parmentier, Lysiane Richert, Bob van de Water, Ruchir R Shah, Richard S Paules

Bioinform Biol Insights. 2020; 14: 1177932220952742. Published online 2020 Sep 29. doi: 10.1177/1177932220952742

PMCID:: PMC7545517

Abstract Article PDF–2.5M

Genomic Characteristics of Invasive Streptococcus pneumoniae Serotype 1 in New Caledonia Prior to the Introduction of PCV13

Mariem Hanachi, Anmol Kiran, Jennifer Cornick, Emna Harigua-Souiai, Dean Everett, Alia Benkahla, Oussama Souiai

Bioinform Biol Insights. 2020; 14: 1177932220962106. Published online 2020 Sep 29. doi: 10.1177/1177932220962106

PMCID:: PMC7545519

Abstract Article PDF–1.1M

Targeting the GRP78-Dependant SARS-CoV-2 Cell Entry by Peptides and Small Molecules

Loubna Allam, Fatima Ghrifi, Hakmi Mohammed, Naima El Hafidi, Rachid El Jaoudi, Jaouad El Harti, Badreddine Lmimouni, Lahcen Belyamani, Azeddine Ibrahimi

Bioinform Biol Insights. 2020; 14: 1177932220965505. Published online 2020 Oct 21. doi: 10.1177/1177932220965505

PMCID:: PMC7585878

Abstract Article PDF–1.5M

An in silico Study of Two Transcription Factors Controlling Diazotrophic Fates of the Azolla Major Cyanobiont Trichormus azollae

Dilantha Gunawardana

Bioinform Biol Insights. 2020; 14: 1177932220977490. Published online 2020 Dec 15. doi: 10.1177/1177932220977490

PMCID:: PMC7747107

Abstract Article PDF–4.1M

Molecular Dynamics Simulation of T10609C and C10676G Mutations of Mitochondrial ND4L Gene Associated With Proton Translocation in Type 2 Diabetes Mellitus and Cataract Patients

Wanda Destiarani, Rahmaniar Mulyani, Muhammad Yusuf, Iman Permana Maksum

Bioinform Biol Insights. 2020; 14: 1177932220978672. Published online 2020 Dec 16. doi: 10.1177/1177932220978672

PMCID:: PMC7747115

Abstract Article PDF–1.2M

Articles from Bioinformatics and Biology Insights are provided here courtesy of SAGE Publications