SNP (Cited) for PubMed (Select 19797732) - SNP

Select item 98735551.

rs9873555 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:100777836 (GRCh38)
3:100496680 (GRCh37)
Canonical SPDI:: NC_000003.12:100777835:C:G
Gene:: ABI3BP (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.138115/2609 (ALFA)
G=0.000035/1 (TOMMO)
G=0.000546/1 (Korea1K)
G=0.05/2 (GENOME_DK)
G=0.095878/480 (1000Genomes)
G=0.114062/511 (Estonian)
G=0.127907/209 (HapMap)
G=0.134644/35639 (TOPMED)
G=0.13718/19217 (GnomAD)
G=0.152778/33 (Qatari)
G=0.161003/597 (TWINSUK)
G=0.164764/635 (ALSPAC)
G=0.168333/101 (NorthernSweden)
G=0.188377/188 (GoNL)
C=0.333333/2 (Siberian)
C=0.46875/30 (SGDP_PRJ)
HGVS:: NC_000003.12:g.100777836C>G, NC_000003.11:g.100496680C>G

Select item 98502732.

rs9850273 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:100780521 (GRCh38)
3:100499365 (GRCh37)
Canonical SPDI:: NC_000003.12:100780520:G:A,NC_000003.12:100780520:G:T
Gene:: ABI3BP (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.238087/5546 (ALFA)
A=0.075/3 (GENOME_DK)
A=0.158482/710 (Estonian)
A=0.174757/648 (TWINSUK)
A=0.177218/683 (ALSPAC)
A=0.179359/179 (GoNL)
A=0.183706/115 (Chileans)
A=0.21/126 (NorthernSweden)
A=0.271028/58 (Vietnamese)
A=0.316461/44216 (GnomAD)
A=0.327508/86688 (TOPMED)
A=0.328704/71 (Qatari)
A=0.332423/974 (KOREAN)
A=0.361181/1809 (1000Genomes)
A=0.363012/6084 (TOMMO)
G=0.375/9 (Siberian)
A=0.382576/303 (PRJEB37584)
G=0.396/99 (SGDP_PRJ)
A=0.431217/815 (HapMap)
HGVS:: NC_000003.12:g.100780521G>A, NC_000003.12:g.100780521G>T, NC_000003.11:g.100499365G>A, NC_000003.11:g.100499365G>T

Select item 67778103.

rs6777810 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:100528298 (GRCh38)
3:100247142 (GRCh37)
Canonical SPDI:: NC_000003.12:100528297:C:T
Gene:: TMEM45A (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.489558/150171 (ALFA)
C=0.3/12 (Siberian)
C=0.302752/132 (SGDP_PRJ)
T=0.35514/76 (Vietnamese)
T=0.371258/6222 (TOMMO)
T=0.384825/705 (Korea1K)
C=0.391949/740 (HapMap)
T=0.397468/314 (PRJEB37584)
T=0.40273/1180 (KOREAN)
C=0.405954/107452 (TOPMED)
C=0.407089/2039 (1000Genomes)
C=0.416667/90 (Qatari)
C=0.418298/58555 (GnomAD)
T=0.425/1904 (Estonian)
T=0.432866/432 (GoNL)
T=0.45/18 (GENOME_DK)
T=0.453345/515 (Daghestan)
T=0.459459/34 (PRJEB36033)
T=0.47068/1814 (ALSPAC)
C=0.470729/981 (HGDP_Stanford)
T=0.476667/286 (NorthernSweden)
T=0.478964/1776 (TWINSUK)
T=0.486381/99745 (GENOGRAPHIC)
HGVS:: NC_000003.12:g.100528298C>T, NC_000003.11:g.100247142C>T

dbSNP