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Definitions for gc

Type	Member of	File	Line
function prototype or declaration	CDataLoader	/include/objmgr/data_loader.hpp	459
function definition	CLoadInfoMap	/include/objtools/data_loaders/genbank/impl/gbload_util.hpp	309
function definition		/src/app/pubseq_gateway/server/test/utils/cache_test.cpp	19
function definition	CDataLoader	/src/objmgr/data_loader.cpp	115
function definition	CGBDataLoader_Native	/src/objtools/data_loaders/genbank/gbnative.cpp	1006

5 declarations in 5 files.

References to gc

File	Line
/include/algo/blast/api/blast_options.hpp	275 438
/include/algo/blast/api/blastx_options.hpp	77 77
/include/algo/blast/api/rpstblastn_options.hpp	68 69
/include/algo/blast/api/tblastn_options.hpp	89 90
/include/algo/blast/api/tblastx_options.hpp	82 83 92 93
/include/algo/sequence/cpg.hpp	60 61
/include/gui/opengl/glutils.hpp	154 154
/include/gui/packages/pkg_sequence_edit/far_pointer_seq.hpp	121
/include/gui/utils/splines/Splines.hh	552 555 556 938 1327 1741 1744 1745 2662 2665 2666 2933 2936 2937
/include/gui/widgets/edit/paint_alignment.hpp	111 112 114 116 117 119 120 122 126 132
/include/gui/widgets/edit/paint_sequence.hpp	133 134 136 137 138 139 140 141 143 144 146 147 149 151 152 153 154 155 163
/include/objects/seqfeat/Genetic_code_table.hpp	151 158 162
/include/objmgr/data_loader.hpp	459
/include/objtools/data_loaders/genbank/gbnative.hpp	191
/include/objtools/data_loaders/genbank/impl/gbload_util.hpp	309
/include/util/bitset/bmaggregator.h	2286 2294 2307 2334 2342 2357 2359 2361
/include/util/bitset/bmavx2.h	3558 3559 3561 3562
/include/util/bitset/bmdbg.h	576 577 579 579
/include/util/bitset/bmfunc.h	5253 5255 5259 5263 5265 10191 10209 10211 10213 10214
/include/util/bitset/bmserial.h	1666 1682 1698 1700 1700 1716 1716 1717 1718 1725 1748 1754 1766
/include/util/bitset/bmsse4.h	1028 1130 1144 1206 2234 2235 2238 2239
/include/util/bitset/bmxor.h	99 102 140 154 157 196 210 214 217 219 441 444 447 448 450 462 464 465 963 1516 1517 1641 1648 1651 1653 1655 1704 1705 1721 1722 1723
/scripts/common/impl/favor-static	11 11
/src/algo/align/prosplign/intron.hpp	334 340 351 378 381
/src/algo/align/splign/compart_matching.cpp	238 244
/src/algo/align/util/score_lookup.cpp	1011 1012 1013
/src/algo/blast/api/blast_aux.cpp	640 641 657 658
/src/algo/blast/api/blast_options_cxx.cpp	1478 1481 1482 1485 2390 2393 2394 2397
/src/algo/blast/api/blast_options_local_priv.cpp	347 349
/src/algo/blast/api/blast_options_local_priv.hpp	155 320 1016 1018
/src/algo/blast/api/blast_setup_cxx.cpp	555 556 560 561 587 802 803 806 807 808
/src/algo/blast/unit_tests/api/gencode_singleton_unit_test.cpp	55 56 66 67 78 79 80
/src/algo/sequence/cpg.cpp	46 49 55 63
/src/app/blast/update_blastdb.pl	136
/src/app/pubseq_gateway/server/test/utils/cache_test.cpp	19 77
/src/build-system/project_tree_builder_gui/src/ptbgui/PtbguiMain.java	897
/src/gui/objects/assembly_info.cpp	402 405 413 419
/src/gui/objutils/basic_converters.cpp	1530 1535 1560 1561 1566 1567 1573 1574 1578 1579 1583 1584 1603 1604 1622 1624 1625 1661 1662 1662 1665 1667 1668 1687 1689 1690 1693 1693 1696
/src/gui/packages/pkg_sequence/cpg_search_tool.cpp	660 671
/src/gui/packages/pkg_sequence/cpg_search_tool.hpp	199
/src/gui/packages/pkg_sequence/orf_search_tool.cpp	239 243 621 623 624 642
/src/gui/packages/pkg_sequence/orf_search_tool.hpp	100
/src/gui/packages/pkg_sequence_edit/barcode_tool.cpp	580 581 586 588 623 629 630 631 632
/src/gui/packages/pkg_sequence_edit/editing_action_features.cpp	2259 2260 2274 2281 2286
/src/gui/packages/pkg_sequence_edit/far_pointer_seq.cpp	191 192 196 199 225 231 233 235
/src/gui/packages/pkg_sequence_edit/featedit_util.cpp	1353 1354 1355 1387 1388
/src/gui/utils/splines/SplineHermite.cpp	259 265 267 269 272 273 274
/src/gui/utils/splines/Splines.cpp	567 573 575 578 579
/src/gui/widgets/edit/paint_alignment.cpp	81 82 83 660 661 663 664 686 696 742 749 750 751 754 762 767 790 798 803 819 822 823 827 831 837 838 839 843 845 847 849 855 857 858 860 873 873 875 879 880 884 886 888 889 906 921 924 926 927 935 937 938 940 946 954 955 983 1016 1018 1019 1020 1022 1025 1027 1032 1036 1044 1047
/src/gui/widgets/edit/paint_sequence.cpp	126 127 128 885 886 888 889 909 915 988 995 996 997 1000 1008 1013 1036 1044 1049 1066 1070 1071 1072 1073 1077 1079 1085 1086 1087 1091 1093 1095 1097 1100 1105 1109 1116 1116 1118 1119 1122 1126 1130 1136 1137 1138 1139 1143 1145 1147 1148 1153 1158 1164 1170 1176 1182 1188 1193 1199 1200 1262 1266 1267 1268 1272 1280 1284 1285 1286 1289 1291 1298 1307 1312 1314 1315 1316 1319 1321 1328 1336 1340 1341 1357 1361 1363 1364 1365 1371 1379 1382 1383 1384 1389 1390 1415 1419 1421 1427 1431 1433 1434 1435 1441 1445 1446 1451 1452 1457 1458 1463 1464 1469 1470 1475 1476 1481 1515 1517 1518 1519 1521 1524 1526 1531 1535 1543 1546 1552 1553
/src/gui/widgets/edit/scriptpanel.cpp	585 586 591 593
/src/objects/seqfeat/Genetic_code_table.cpp	255 256 262 265 302 304 320 322 332 334 478 484 560 565 621 623 639 641
/src/objects/taxon1/unit_test/taxon1_unit_test.cpp	505 506 508 509 510 512
/src/objmgr/data_loader.cpp	115
/src/objtools/align_format/showalign.cpp	696 700 704
/src/objtools/cleanup/newcleanupp.cpp	3702 3703 3704
/src/objtools/data_loaders/genbank/gbnative.cpp	1006
/src/objtools/validator/cdregion_validator.cpp	245 249 251 253 256 262 263 283 284 306 307 602 605 607
/src/util/bitset/stress_test/stress32.cpp	2911 2913 2915 2953 2971 2977 2980 2986 2989 2995 3004 3012 3017 3026 3029 3041

546 references in 59 files.