NR0B2 (nuclear receptor subfamily 0 group B member 2) - Rat Genome Database

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Gene: NR0B2 (nuclear receptor subfamily 0 group B member 2) Canis lupus familiaris
Analyze
Symbol: NR0B2
Name: nuclear receptor subfamily 0 group B member 2
RGD ID: 12375438
Description: ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); nuclear retinoid X receptor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); bile acid and bile salt transport (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,234,482 - 73,236,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1CanFam3.1 Ensembl273,234,586 - 73,236,206 (+)EnsemblCanFam3.1canFam3CanFam3.1Dog10K_Boxer_Tasha269,812,568 - 69,814,592 (+)NCBIDog10K_Boxer_TashaROS_Cfam_1.0273,798,290 - 73,800,314 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0 Ensembl273,798,352 - 73,800,322 (+)EnsemblROS_Cfam_1.0 EnsemblUMICH_Zoey_3.1270,623,285 - 70,625,309 (+)NCBIUMICH_Zoey_3.1UNSW_CanFamBas_1.0271,628,711 - 71,630,736 (+)NCBIUNSW_CanFamBas_1.0UU_Cfam_GSD_1.0272,631,901 - 72,633,925 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
NR0B2Dogalcoholic hepatitis treatmentISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816
NR0B2Dogdiabetes mellitus  ISONr0b2 (Rattus norvegicus)9068941mRNA:increased expression:pancreatic isletRGDPMID:17259388 and REF_RGD_ID:2311606
NR0B2Dogintrahepatic cholestasis  ISONr0b2 (Rattus norvegicus)9068941mRNA and protein:increased expression:liverRGDPMID:18578998 and REF_RGD_ID:2311605
NR0B2Dogtype 2 diabetes mellitus  ISONR0B2 (Homo sapiens)9068941DNA:polymorphisms: :multipleRGDPMID:18781616 and REF_RGD_ID:2311604

Imported Disease Annotations - ClinVar

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
NR0B2DogLynch syndrome  ISONR0B2 (Homo sapiens)8554872ClinVar Annotator: match by term: APC-mutation negative familial colorectal cancerClinVarPMID:11136233 more ...
NR0B2DogLynch syndrome  ISONR0B2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11136233 more ...
NR0B2Dogobesity  ISONR0B2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11136233 more ...
NR0B2Dogretinitis pigmentosa 59  ISONR0B2 (Homo sapiens)8554872ClinVar Annotator: match by term: Retinitis pigmentosa 59ClinVarPMID:28492532

Imported Disease Annotations - CTD

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2DogChemical and Drug Induced Liver Injury  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:29943110NR0B2Dogcognitive disorder  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29382564NR0B2DogDiabetes Complications  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29382564NR0B2DogExperimental Liver Cirrhosis  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17072980NR0B2Doghepatocellular carcinoma  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:23811326NR0B2Doglipid storage disease  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15342952 more ...NR0B2Dogsteatotic liver disease  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:27664470

Imported Disease Annotations - OMIM

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Dogobesity  ISONR0B2 (Homo sapiens)7240710 OMIM 

Gene Ontology Annotations    Click to see Annotation Detail View

Biological Process

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Doganimal organ regeneration  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15904869 and REF_RGD_ID:2311607NR0B2Dogbile acid and bile salt transport  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816NR0B2Dogcircadian regulation of gene expression involved_inIEAUniProtKB:Q62227 and ensembl:ENSMUSP00000039175150520179 EnsemblGO_REF:0000107NR0B2Dogcircadian rhythm involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dognegative regulation of DNA-templated transcription  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2Dognegative regulation of DNA-templated transcription involved_inIEAUniProtKB:Q62227 and ensembl:ENSMUSP00000039175150520179 EnsemblGO_REF:0000107NR0B2Dognegative regulation of DNA-templated transcription involved_inIEAARBA:ARBA00029084150520179 UniProtGO_REF:0000117NR0B2Dognegative regulation of gene expression involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dognegative regulation of transcription by RNA polymerase II  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2DogNotch signaling pathway involved_inIEAUniProtKB:Q62227 and ensembl:ENSMUSP00000039175150520179 EnsemblGO_REF:0000107NR0B2DogNotch signaling pathway acts_upstream_of_or_withinISONr0b2 (Mus musculus)9068941 PMID:25446530MGIPMID:25446530NR0B2Dogpositive regulation of DNA-templated transcription acts_upstream_of_or_withinISONR0B2 (Homo sapiens)9068941 PMID:27471003MGIPMID:27471003NR0B2Dogpositive regulation of DNA-templated transcription involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogpositive regulation of gene expression involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogpositive regulation of insulin secretion  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:17259388 and REF_RGD_ID:2311606NR0B2Dogresponse to ethanol  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816NR0B2Dogresponse to glucose  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:17259388 and REF_RGD_ID:2311606NR0B2Dogresponse to organic cyclic compound  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816

Cellular Component

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Dogchromatin part_ofIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogcytoplasm located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogcytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044NR0B2Dogintracellular membrane-bounded organelle located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dognucleoplasm located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dognucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043NR0B2Dognucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044NR0B2Dognucleus located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogprotein-containing complex  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:10648597 more ...

Molecular Function

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Dognuclear retinoic acid receptor binding  ISORARA (Homo sapiens)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Dognuclear retinoid X receptor binding  ISORxra (Mus musculus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Dognuclear thyroid hormone receptor binding  ISOThrb (Rattus norvegicus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Dogperoxisome proliferator activated receptor binding  ISOPpara (Mus musculus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Dogprotein binding enablesISOUniProtKB:O00482-19068941 PMID:22504882IntActPMID:22504882NR0B2Dogprotein binding enablesISOUniProtKB:Q02363 and UniProtKB:Q135629068941 PMID:14752053UniProtPMID:14752053NR0B2Dogprotein binding enablesISOUniProtKB:P50570-2 and UniProtKB:P542529068941 PMID:32814053IntActPMID:32814053NR0B2Dogprotein binding enablesISOUniProtKB:O15379 and UniProtKB:Q135479068941 PMID:17895379IntActPMID:17895379NR0B2Dogprotein binding enablesISOUniProtKB:P62508-3 more ...9068941 PMID:32296183IntActPMID:32296183NR0B2Dogprotein binding enablesISOUniProtKB:P04637 and UniProtKB:Q009879068941 PMID:22575647IntActPMID:22575647NR0B2Dogprotein binding enablesISOUniProtKB:Q96RI19068941 PMID:15317749UniProtPMID:15317749NR0B2Dogprotein binding enablesISOUniProtKB:O005719068941 PMID:28128295UniProtPMID:28128295NR0B2Dogprotein binding enablesISOUniProtKB:P033729068941 PMID:16709599UniProtPMID:16709599NR0B2Dogprotein binding enablesISOUniProtKB:Q96EB69068941 PMID:20375098IntActPMID:20375098NR0B2Dogprotein binding enablesISOUniProtKB:P70196 and UniProtKB:Q042079068941 MGI:5086034 and PMID:21725320IntActMGI:5086034 and PMID:21725320NR0B2Dogprotein binding enablesISOUniProtKB:P51450 and UniProtKB:Q3UV559068941 MGI:6275703 and PMID:25212631UniProtMGI:6275703 and PMID:25212631NR0B2Dogprotein binding enablesISOUniProtKB:Q923E49068941 MGI:5014028 and PMID:20375098IntActMGI:5014028 and PMID:20375098NR0B2Dogprotein domain specific binding enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogprotein homodimerization activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogprotein-containing complex binding  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:10648597 and REF_RGD_ID:2311608NR0B2Dogtranscription corepressor activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Dogtranscription factor binding  ISOHnf4a (Rattus norvegicus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Dogtranscription factor binding  ISOJund (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2Dogtranscription regulator inhibitor activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107

Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NR0B2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,234,482 - 73,236,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1CanFam3.1 Ensembl273,234,586 - 73,236,206 (+)EnsemblCanFam3.1canFam3CanFam3.1Dog10K_Boxer_Tasha269,812,568 - 69,814,592 (+)NCBIDog10K_Boxer_TashaROS_Cfam_1.0273,798,290 - 73,800,314 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0 Ensembl273,798,352 - 73,800,322 (+)EnsemblROS_Cfam_1.0 EnsemblUMICH_Zoey_3.1270,623,285 - 70,625,309 (+)NCBIUMICH_Zoey_3.1UNSW_CanFamBas_1.0271,628,711 - 71,630,736 (+)NCBIUNSW_CanFamBas_1.0UU_Cfam_GSD_1.0272,631,901 - 72,633,925 (+)NCBIUU_Cfam_GSD_1.0
NR0B2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,911,489 - 26,913,975 (-)NCBIGRCh38GRCh38hg38GRCh38GRCh38.p14 Ensembl126,911,489 - 26,913,975 (-)EnsemblGRCh38hg38GRCh38GRCh37127,237,980 - 27,240,466 (-)NCBIGRCh37GRCh37hg19GRCh37Build 36127,110,566 - 27,113,047 (-)NCBINCBI36Build 36hg18NCBI36Build 34126,922,120 - 26,924,602NCBICelera125,635,071 - 25,637,663 (-)NCBICeleraCytogenetic Map1p36.11NCBIHuRef125,491,554 - 25,494,146 (-)NCBIHuRefCHM1_1127,351,340 - 27,353,932 (-)NCBICHM1_1T2T-CHM13v2.0126,749,548 - 26,752,039 (-)NCBIT2T-CHM13v2.0
Nr0b2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,280,687 - 133,283,997 (+)NCBIGRCm39GRCm39mm39GRCm39 Ensembl4133,280,687 - 133,283,847 (+)EnsemblGRCm39 EnsemblGRCm384133,553,376 - 133,556,686 (+)NCBIGRCm38GRCm38mm10GRCm38GRCm38.p6 Ensembl4133,553,376 - 133,556,536 (+)EnsemblGRCm38mm10GRCm38MGSCv374133,109,305 - 133,112,451 (+)NCBIGRCm37MGSCv37mm9NCBIm37MGSCv364132,825,466 - 132,828,612 (+)NCBIMGSCv36mm8Celera4131,722,949 - 131,726,070 (+)NCBICeleraCytogenetic Map4D2.3NCBIcM Map466.25NCBI
Nr0b2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85151,063,160 - 151,066,475 (+)NCBIGRCr8mRatBN7.25145,779,294 - 145,782,609 (+)NCBImRatBN7.2mRatBN7.2mRatBN7.2 Ensembl5145,779,294 - 145,782,609 (+)EnsemblmRatBN7.2 EnsemblUTH_Rnor_SHR_Utx5148,481,537 - 148,484,849 (+)NCBIRnor_SHRUTH_Rnor_SHR_UtxUTH_Rnor_SHRSP_BbbUtx_1.05150,251,139 - 150,254,451 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_WKY_Bbb_1.05150,237,696 - 150,241,008 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0Rnor_6.05151,776,004 - 151,779,319 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0Rnor_6.0 Ensembl5151,776,004 - 151,779,319 (+)EnsemblRnor6.0rn6Rnor6.0Rnor_5.05155,465,275 - 155,468,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0RGSC_v3.45151,524,685 - 151,528,000 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4RGSC_v3.15151,534,723 - 151,538,039 (-)NCBICelera5144,199,860 - 144,203,175 (+)NCBICeleraRH 3.4 Map5977.8RGDCytogenetic Map5q36NCBI
Nr0b2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554526,250,889 - 6,254,541 (-)EnsemblChiLan1.0ChiLan1.0NW_0049554526,251,047 - 6,253,541 (-)NCBIChiLan1.0ChiLan1.0
NR0B2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21199,956,001 - 199,958,461 (+)NCBINHGRI_mPanPan1-v2NHGRI_mPanPan11199,060,102 - 199,062,634 (+)NCBINHGRI_mPanPan1Mhudiblu_PPA_v0126,174,055 - 26,176,689 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3PanPan1.1127,230,362 - 27,232,949 (-)NCBIpanpan1.1PanPan1.1panPan2PanPan1.1 Ensembl127,230,362 - 27,232,942 (-)Ensemblpanpan1.1panPan2
Nr0b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505845,491,739 - 45,495,184 (-)NCBIHiC_Itri_2SpeTri2.0 EnsemblNW_00493647411,316,700 - 11,319,669 (-)EnsemblSpeTri2.0SpeTri2.0 EnsemblSpeTri2.0NW_00493647411,316,857 - 11,319,669 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR0B2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,225,694 - 84,228,481 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1Sscrofa11.1684,225,670 - 84,228,156 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1Sscrofa10.2677,795,866 - 77,798,355 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NR0B2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120105,850,328 - 105,853,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2ChlSab1.1 Ensembl20105,850,598 - 105,853,060 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2Vero_WHO_p1.0NW_02366603310,579,506 - 10,582,085 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr0b2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476410,892,481 - 10,899,215 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2HetGla 1.0NW_00462476410,896,728 - 10,899,898 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
Variants

.
Variants in NR0B2
21 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 6 6 6
Low 5 2 3
Below cutoff 5 5 7 6 6 4 8 5 5 1
View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005617724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038470598 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038531441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038595664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038659743 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000373 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSCAFT00000019466   &xrArr;   ENSCAFP00000018058
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl273,234,586 - 73,236,206 (+)Ensembl
RefSeq Acc Id: ENSCAFT00845019822   &xrArr;   ENSCAFP00845015518
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl273,798,352 - 73,800,322 (+)Ensembl
RefSeq Acc Id: XM_005617724   &xrArr;   XP_005617781
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1273,234,482 - 73,236,548 (+)NCBIDog10K_Boxer_Tasha269,812,568 - 69,814,592 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038470598   &xrArr;   XP_038326526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1270,623,285 - 70,625,309 (+)NCBI
RefSeq Acc Id: XM_038531441   &xrArr;   XP_038387369
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0272,631,901 - 72,633,925 (+)NCBI
RefSeq Acc Id: XM_038595664   &xrArr;   XP_038451592
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0271,628,711 - 71,630,736 (+)NCBI
RefSeq Acc Id: XM_038659743   &xrArr;   XP_038515671
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0273,798,290 - 73,800,314 (+)NCBI
Protein Sequences
Protein RefSeqs XP_005617781 (Get FASTA)   NCBI Sequence Viewer  
  XP_038326526 (Get FASTA)   NCBI Sequence Viewer  
  XP_038387369 (Get FASTA)   NCBI Sequence Viewer  
  XP_038451592 (Get FASTA)   NCBI Sequence Viewer  
  XP_038515671 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000018058.5
  ENSCAFP00030020835.1
  ENSCAFP00040005816.1
  ENSCAFP00845015518
  ENSCAFP00845015518.1
RefSeq Acc Id: XP_005617781   &xlArr;   XM_005617724
- UniProtKB: A0A8C0L662 (UniProtKB/TrEMBL),   A0A8I3NE48 (UniProtKB/TrEMBL),   A0A8P0NE91 (UniProtKB/TrEMBL),   A0A8C0Q239 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSCAFP00000018058   &xlArr;   ENSCAFT00000019466
RefSeq Acc Id: XP_038326526   &xlArr;   XM_038470598
RefSeq Acc Id: XP_038451592   &xlArr;   XM_038595664
RefSeq Acc Id: XP_038515671   &xlArr;   XM_038659743
- UniProtKB: A0A8C0L662 (UniProtKB/TrEMBL),   A0A8I3NE48 (UniProtKB/TrEMBL),   A0A8P0NE91 (UniProtKB/TrEMBL),   A0A8C0Q239 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038387369   &xlArr;   XM_038531441
- UniProtKB: A0A8C0L662 (UniProtKB/TrEMBL),   A0A8C0Q239 (UniProtKB/TrEMBL),   A0A8I3NE48 (UniProtKB/TrEMBL),   A0A8P0NE91 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSCAFP00845015518   &xlArr;   ENSCAFT00845019822
Protein Domains
NR LBD

Promoters
RGD ID:13682584
Promoter ID:EPDNEW_C652
Type:single initiation site
Name:NR0B2_1
Description:nuclear receptor subfamily 0 group B member 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1273,234,543 - 73,234,603EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000012261 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030012924 UniProtKB/TrEMBL
  ENSCAFG00040003535 UniProtKB/TrEMBL
  ENSCAFG00845011182 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000019466.5 UniProtKB/TrEMBL
  ENSCAFT00030023907.1 UniProtKB/TrEMBL
  ENSCAFT00040006715.1 UniProtKB/TrEMBL
  ENSCAFT00845019822 ENTREZGENE
  ENSCAFT00845019822.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/TrEMBL
InterPro NHR-like_dom_sf UniProtKB/TrEMBL
  NR0B1/2 UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/TrEMBL
KEGG Report cfa:612125 UniProtKB/TrEMBL
NCBI Gene NR0B2 ENTREZGENE
PANTHER NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B MEMBER 2 UniProtKB/TrEMBL
  PTHR24081 UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/TrEMBL
PRINTS STRDHORMONER UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/TrEMBL
SMART HOLI UniProtKB/TrEMBL
Superfamily-SCOP SSF48508 UniProtKB/TrEMBL
UniProt A0A8C0L662 ENTREZGENE
  A0A8C0Q239 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NE48 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0NE91 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:43939 ENTREZGENE

 


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