NR0B2 (nuclear receptor subfamily 0 group B member 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Gene: NR0B2 (nuclear receptor subfamily 0 group B member 2) Sus scrofa
Analyze
Symbol: NR0B2
Name: nuclear receptor subfamily 0 group B member 2
RGD ID: 14148852
Description: ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); nuclear retinoid X receptor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); bile acid and bile salt transport (ortholog); circadian regulation of gene expression (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN protein-containing complex (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: orphan nuclear receptor SHP; SHP; small heterodimer partner
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Sscrofa11.1 - Pig Sscrofa11.1 Assembly
Position:
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,225,694 - 84,228,481 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1Sscrofa11.1684,225,670 - 84,228,156 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1Sscrofa10.2677,795,866 - 77,798,355 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JBrowse: View Region in Genome Browser (JBrowse)
Model


Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
NR0B2Pigalcoholic hepatitis treatmentISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816
NR0B2Pigdiabetes mellitus  ISONr0b2 (Rattus norvegicus)9068941mRNA:increased expression:pancreatic isletRGDPMID:17259388 and REF_RGD_ID:2311606
NR0B2Pigintrahepatic cholestasis  ISONr0b2 (Rattus norvegicus)9068941mRNA and protein:increased expression:liverRGDPMID:18578998 and REF_RGD_ID:2311605
NR0B2Pigtype 2 diabetes mellitus  ISONR0B2 (Homo sapiens)9068941DNA:polymorphisms: :multipleRGDPMID:18781616 and REF_RGD_ID:2311604

Imported Disease Annotations - ClinVar

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
NR0B2PigLynch syndrome  ISONR0B2 (Homo sapiens)8554872ClinVar Annotator: match by term: APC-mutation negative familial colorectal cancerClinVarPMID:11136233 more ...
NR0B2PigLynch syndrome  ISONR0B2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11136233 more ...
NR0B2Pigobesity  ISONR0B2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:11136233 more ...
NR0B2Pigretinitis pigmentosa 59  ISONR0B2 (Homo sapiens)8554872ClinVar Annotator: match by term: Retinitis pigmentosa 59ClinVarPMID:28492532

Imported Disease Annotations - CTD

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2PigChemical and Drug Induced Liver Injury  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: therapeuticCTDPMID:29943110NR0B2Pigcognitive disorder  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29382564NR0B2PigDiabetes Complications  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:29382564NR0B2PigExperimental Liver Cirrhosis  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17072980NR0B2Pighepatocellular carcinoma  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:23811326NR0B2Piglipid storage disease  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:15342952 more ...NR0B2Pigsteatotic liver disease  ISONR0B2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:27664470

Imported Disease Annotations - OMIM

Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Pigobesity  ISONR0B2 (Homo sapiens)7240710 OMIM 

Gene Ontology Annotations    Click to see Annotation Detail View

Biological Process

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Piganimal organ regeneration  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15904869 and REF_RGD_ID:2311607NR0B2Pigbile acid and bile salt transport  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816NR0B2Pigcircadian regulation of gene expression involved_inISONr0b2 (Mus musculus)9068941 MGI:6275703 more ...UniProtMGI:6275703 more ...NR0B2Pigcircadian rhythm involved_inIBAMGI:1346344 more ...150520179 GO_CentralGO_REF:0000033NR0B2Pigcircadian rhythm involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pignegative regulation of DNA-templated transcription  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2Pignegative regulation of DNA-templated transcription involved_inIEAARBA:ARBA00029084150520179 UniProtGO_REF:0000117NR0B2Pignegative regulation of gene expression involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pignegative regulation of transcription by RNA polymerase II involved_inIBAMGI:1352460 more ...150520179 GO_CentralGO_REF:0000033NR0B2Pignegative regulation of transcription by RNA polymerase II  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2PigNotch signaling pathway acts_upstream_of_or_withinISONr0b2 (Mus musculus)9068941 PMID:25446530MGIPMID:25446530NR0B2Pigpositive regulation of DNA-templated transcription acts_upstream_of_or_withinISONR0B2 (Homo sapiens)9068941 PMID:27471003MGIPMID:27471003NR0B2Pigpositive regulation of DNA-templated transcription involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigpositive regulation of gene expression involved_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigpositive regulation of insulin secretion  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:17259388 and REF_RGD_ID:2311606NR0B2Pigresponse to ethanol  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816NR0B2Pigresponse to glucose  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:17259388 and REF_RGD_ID:2311606NR0B2Pigresponse to organic cyclic compound  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:27939985 and REF_RGD_ID:15036816

Cellular Component

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Pigchromatin part_ofIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigcytoplasm is_active_inIBAMGI:1352460 more ...150520179 GO_CentralGO_REF:0000033NR0B2Pigcytoplasm located_inIEAUniProtKB-SubCell:SL-0086150520179 UniProtGO_REF:0000044NR0B2Pigcytoplasm located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigintracellular membrane-bounded organelle located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pignucleoplasm located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pignucleus is_active_inIBAMGI:1352460 more ...150520179 GO_CentralGO_REF:0000033NR0B2Pignucleus located_inIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pignucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044NR0B2Pignucleus located_inIEAUniProtKB-KW:KW-0539150520179 UniProtGO_REF:0000043NR0B2Pigprotein-containing complex  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:10648597 more ...

Molecular Function

  
Object SymbolSpeciesTermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)NR0B2Pignuclear retinoic acid receptor binding  ISORARA (Homo sapiens)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Pignuclear retinoid X receptor binding  ISORxra (Mus musculus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Pignuclear thyroid hormone receptor binding  ISOThrb (Rattus norvegicus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Pigperoxisome proliferator activated receptor binding  ISOPpara (Mus musculus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Pigprotein binding enablesISOUniProtKB:O00482-19068941 PMID:22504882IntActPMID:22504882NR0B2Pigprotein binding enablesISOUniProtKB:P50570-2 and UniProtKB:P542529068941 PMID:32814053IntActPMID:32814053NR0B2Pigprotein binding enablesISOUniProtKB:P62508-3 more ...9068941 PMID:32296183IntActPMID:32296183NR0B2Pigprotein binding enablesISOUniProtKB:O15379 and UniProtKB:Q135479068941 PMID:17895379IntActPMID:17895379NR0B2Pigprotein binding enablesISOUniProtKB:Q02363 and UniProtKB:Q135629068941 PMID:14752053UniProtPMID:14752053NR0B2Pigprotein binding enablesISOUniProtKB:P04637 and UniProtKB:Q009879068941 PMID:22575647IntActPMID:22575647NR0B2Pigprotein binding enablesISOUniProtKB:P51450 and UniProtKB:Q3UV559068941 MGI:6275703 and PMID:25212631UniProtMGI:6275703 and PMID:25212631NR0B2Pigprotein binding enablesISOUniProtKB:Q96EB69068941 PMID:20375098IntActPMID:20375098NR0B2Pigprotein binding enablesISOUniProtKB:O005719068941 PMID:28128295UniProtPMID:28128295NR0B2Pigprotein binding enablesISOUniProtKB:P033729068941 PMID:16709599UniProtPMID:16709599NR0B2Pigprotein binding enablesISOUniProtKB:Q923E49068941 MGI:5014028 and PMID:20375098IntActMGI:5014028 and PMID:20375098NR0B2Pigprotein binding enablesISOUniProtKB:P70196 and UniProtKB:Q042079068941 MGI:5086034 and PMID:21725320IntActMGI:5086034 and PMID:21725320NR0B2Pigprotein binding enablesISOUniProtKB:Q96RI19068941 PMID:15317749UniProtPMID:15317749NR0B2Pigprotein domain specific binding enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigprotein homodimerization activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigprotein-containing complex binding  ISONr0b2 (Rattus norvegicus)9068941 RGDPMID:10648597 and REF_RGD_ID:2311608NR0B2Pigtranscription corepressor activity enablesIBAMGI:1352460 more ...150520179 GO_CentralGO_REF:0000033NR0B2Pigtranscription corepressor activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107NR0B2Pigtranscription factor binding  ISOJund (Rattus norvegicus)9068941 RGDPMID:15860571 and REF_RGD_ID:1600916NR0B2Pigtranscription factor binding  ISOHnf4a (Rattus norvegicus)9068941 RGDPMID:9003453 and REF_RGD_ID:633448NR0B2Pigtranscription regulator inhibitor activity enablesIEAUniProtKB:Q15466 and ensembl:ENSP00000254227150520179 EnsemblGO_REF:0000107

Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References
Additional References at PubMed
PMID:16706925   PMID:30032202  


Genomics

Comparative Map Data
NR0B2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,225,694 - 84,228,481 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1Sscrofa11.1684,225,670 - 84,228,156 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1Sscrofa10.2677,795,866 - 77,798,355 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NR0B2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38126,911,489 - 26,913,975 (-)NCBIGRCh38GRCh38hg38GRCh38GRCh38.p14 Ensembl126,911,489 - 26,913,975 (-)EnsemblGRCh38hg38GRCh38GRCh37127,237,980 - 27,240,466 (-)NCBIGRCh37GRCh37hg19GRCh37Build 36127,110,566 - 27,113,047 (-)NCBINCBI36Build 36hg18NCBI36Build 34126,922,120 - 26,924,602NCBICelera125,635,071 - 25,637,663 (-)NCBICeleraCytogenetic Map1p36.11NCBIHuRef125,491,554 - 25,494,146 (-)NCBIHuRefCHM1_1127,351,340 - 27,353,932 (-)NCBICHM1_1T2T-CHM13v2.0126,749,548 - 26,752,039 (-)NCBIT2T-CHM13v2.0
Nr0b2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,280,687 - 133,283,997 (+)NCBIGRCm39GRCm39mm39GRCm39 Ensembl4133,280,687 - 133,283,847 (+)EnsemblGRCm39 EnsemblGRCm384133,553,376 - 133,556,686 (+)NCBIGRCm38GRCm38mm10GRCm38GRCm38.p6 Ensembl4133,553,376 - 133,556,536 (+)EnsemblGRCm38mm10GRCm38MGSCv374133,109,305 - 133,112,451 (+)NCBIGRCm37MGSCv37mm9NCBIm37MGSCv364132,825,466 - 132,828,612 (+)NCBIMGSCv36mm8Celera4131,722,949 - 131,726,070 (+)NCBICeleraCytogenetic Map4D2.3NCBIcM Map466.25NCBI
Nr0b2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85151,063,160 - 151,066,475 (+)NCBIGRCr8mRatBN7.25145,779,294 - 145,782,609 (+)NCBImRatBN7.2mRatBN7.2mRatBN7.2 Ensembl5145,779,294 - 145,782,609 (+)EnsemblmRatBN7.2 EnsemblUTH_Rnor_SHR_Utx5148,481,537 - 148,484,849 (+)NCBIRnor_SHRUTH_Rnor_SHR_UtxUTH_Rnor_SHRSP_BbbUtx_1.05150,251,139 - 150,254,451 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_WKY_Bbb_1.05150,237,696 - 150,241,008 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0Rnor_6.05151,776,004 - 151,779,319 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0Rnor_6.0 Ensembl5151,776,004 - 151,779,319 (+)EnsemblRnor6.0rn6Rnor6.0Rnor_5.05155,465,275 - 155,468,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0RGSC_v3.45151,524,685 - 151,528,000 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4RGSC_v3.15151,534,723 - 151,538,039 (-)NCBICelera5144,199,860 - 144,203,175 (+)NCBICeleraRH 3.4 Map5977.8RGDCytogenetic Map5q36NCBI
Nr0b2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554526,250,889 - 6,254,541 (-)EnsemblChiLan1.0ChiLan1.0NW_0049554526,251,047 - 6,253,541 (-)NCBIChiLan1.0ChiLan1.0
NR0B2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21199,956,001 - 199,958,461 (+)NCBINHGRI_mPanPan1-v2NHGRI_mPanPan11199,060,102 - 199,062,634 (+)NCBINHGRI_mPanPan1Mhudiblu_PPA_v0126,174,055 - 26,176,689 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3PanPan1.1127,230,362 - 27,232,949 (-)NCBIpanpan1.1PanPan1.1panPan2PanPan1.1 Ensembl127,230,362 - 27,232,942 (-)Ensemblpanpan1.1panPan2
NR0B2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,234,482 - 73,236,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1CanFam3.1 Ensembl273,234,586 - 73,236,206 (+)EnsemblCanFam3.1canFam3CanFam3.1Dog10K_Boxer_Tasha269,812,568 - 69,814,592 (+)NCBIDog10K_Boxer_TashaROS_Cfam_1.0273,798,290 - 73,800,314 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0 Ensembl273,798,352 - 73,800,322 (+)EnsemblROS_Cfam_1.0 EnsemblUMICH_Zoey_3.1270,623,285 - 70,625,309 (+)NCBIUMICH_Zoey_3.1UNSW_CanFamBas_1.0271,628,711 - 71,630,736 (+)NCBIUNSW_CanFamBas_1.0UU_Cfam_GSD_1.0272,631,901 - 72,633,925 (+)NCBIUU_Cfam_GSD_1.0
Nr0b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505845,491,739 - 45,495,184 (-)NCBIHiC_Itri_2SpeTri2.0 EnsemblNW_00493647411,316,700 - 11,319,669 (-)EnsemblSpeTri2.0SpeTri2.0 EnsemblSpeTri2.0NW_00493647411,316,857 - 11,319,669 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR0B2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120105,850,328 - 105,853,076 (+)NCBIChlSab1.1ChlSab1.1chlSab2ChlSab1.1 Ensembl20105,850,598 - 105,853,060 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2Vero_WHO_p1.0NW_02366603310,579,506 - 10,582,085 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nr0b2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476410,892,481 - 10,899,215 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2HetGla 1.0NW_00462476410,896,728 - 10,899,898 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2
Variants

.
Variants in NR0B2
39 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system hemolymphoid system musculoskeletal system nervous system renal system reproductive system respiratory system
High
Medium
Low 3 3 3 4 2 3 2 2 1
Below cutoff 7 1 1 13 2
View RNA-SEQ Expression Data

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003127720 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AEMK02000045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  EF011077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FP015947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  GFLN01132490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSSSCT00000003959   &xrArr;   ENSSSCP00000003868
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1 Ensembl684,225,694 - 84,228,481 (+)Ensembl
RefSeq Acc Id: XM_003127720   &xrArr;   XP_003127768
Type: CODING
Position:
Pig AssemblyChrPosition (strand)Source
Sscrofa11.1684,225,670 - 84,228,156 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_003127768 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein ABK55760 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSSCP00000003868
  ENSSSCP00000003868.2
  ENSSSCP00005017639.1
  ENSSSCP00015020395.1
  ENSSSCP00025020411.1
  ENSSSCP00030033750.1
  ENSSSCP00035037085.1
  ENSSSCP00040034652.1
  ENSSSCP00045041763.1
  ENSSSCP00050026092.1
  ENSSSCP00055024036.1
  ENSSSCP00060020823.1
  ENSSSCP00065007569.1
RefSeq Acc Id: XP_003127768   &xlArr;   XM_003127720
- UniProtKB: F1STR7 (UniProtKB/TrEMBL),   A0A8D1XQX8 (UniProtKB/TrEMBL),   A0A8D0UPZ6 (UniProtKB/TrEMBL),   A0A8D0IQY4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSSSCP00000003868   &xlArr;   ENSSSCT00000003959
Protein Domains
NR LBD


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSSCG00000003565 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
  ENSSSCG00005018324 UniProtKB/TrEMBL
  ENSSSCG00015038421 UniProtKB/TrEMBL
  ENSSSCG00025034947 UniProtKB/TrEMBL
  ENSSSCG00030052852 UniProtKB/TrEMBL
  ENSSSCG00035065881 UniProtKB/TrEMBL
  ENSSSCG00040058982 UniProtKB/TrEMBL
  ENSSSCG00045034751 UniProtKB/TrEMBL
  ENSSSCG00050044565 UniProtKB/TrEMBL
  ENSSSCG00055015323 UniProtKB/TrEMBL
  ENSSSCG00060035889 UniProtKB/TrEMBL
  ENSSSCG00065013920 UniProtKB/TrEMBL
Ensembl Transcript ENSSSCT00000003959 ENTREZGENE
  ENSSSCT00000003959.5 UniProtKB/TrEMBL
  ENSSSCT00005028912.1 UniProtKB/TrEMBL
  ENSSSCT00015051120.1 UniProtKB/TrEMBL
  ENSSSCT00025047641.1 UniProtKB/TrEMBL
  ENSSSCT00030073723.1 UniProtKB/TrEMBL
  ENSSSCT00035088740.1 UniProtKB/TrEMBL
  ENSSSCT00040080094.1 UniProtKB/TrEMBL
  ENSSSCT00045059551.1 UniProtKB/TrEMBL
  ENSSSCT00050060676.1 UniProtKB/TrEMBL
  ENSSSCT00055030170.1 UniProtKB/TrEMBL
  ENSSSCT00060048630.1 UniProtKB/TrEMBL
  ENSSSCT00065018517.1 UniProtKB/TrEMBL
Gene3D-CATH 1.10.565.10 UniProtKB/TrEMBL
InterPro NHR_like_dom_sf UniProtKB/TrEMBL
  NR0B1/2 UniProtKB/TrEMBL
  Nucl_hrmn_rcpt_lig-bd UniProtKB/TrEMBL
  Nuclear_hrmn_rcpt UniProtKB/TrEMBL
KEGG Report ssc:100526226 UniProtKB/TrEMBL
NCBI Gene NR0B2 ENTREZGENE
PANTHER NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B MEMBER 2 UniProtKB/TrEMBL
  PTHR24081 UniProtKB/TrEMBL
Pfam Hormone_recep UniProtKB/TrEMBL
PRINTS STRDHORMONER UniProtKB/TrEMBL
PROSITE NR_LBD UniProtKB/TrEMBL
SMART HOLI UniProtKB/TrEMBL
Superfamily-SCOP SSF48508 UniProtKB/TrEMBL
UniProt A0A8D0IQY4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D0UPZ6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8D1XQX8 ENTREZGENE, UniProtKB/TrEMBL
  F1STR7 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:90868 ENTREZGENE

 


-